Definition Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome.
Accession NC_007086
Length 5,148,708

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The map label for this gene is yfcB [C]

Identifier: 66767889

GI number: 66767889

Start: 1883386

End: 1884312

Strand: Direct

Name: yfcB [C]

Synonym: XC_1565

Alternate gene names: 66767889

Gene position: 1883386-1884312 (Clockwise)

Preceding gene: 66767885

Following gene: 66767890

Centisome position: 36.58

GC content: 66.13

Gene sequence:

>927_bases
ATGACTGCCGCCGCGGCCGACGAACTGCACACCATCATCGACCTGATCCGCTACGGCACCAGCCGTTTCAACGAGGCCGG
TCTCACCTTCGGCCACAGCTACGACAACGCGCTGGACGAAGCCACGCAGCTGGTCCTGCACAGCCTGCACCTGCCGCACG
ATCTGGGCCCGGCCTATGGCCAGGCACGCCTGCTGCGCGCAGAAAAAGAGCGCGTGCTGGCACTGTTCCAGCGCCGCGTC
GACGAGCGCGTGCCGGCGGCATATCTCACCGGCGAGGCCTGGTTTGCCGGGCTGAGTTTCAAGAGCGATGCGCGCGCACT
GGTGCCGCGTTCGCCGATCGCCGAGCTGATCGAAGCGGGCTTCGAGCCCTGGCTGGGCGGCCGCGAAGTGACCCGCGCGC
TGGACCTGTGCACCGGCTCCGGCTGCATCGCCATCGCGATGGGCCACTACAACCCGCATTGGGACGTGGACGGCGTGGAC
ATCAGCGATGACGCGCTGGCGCTGGCCGCCGAGAACAAGGCGCGCCTGCATGCCGACAACGTCAGCCTGCTCAAATCCGA
TCTGTTCACCGGTCTGGCCGGGCGGCAGTACGACCTGATCGTGACCAATCCGCCGTATGTCACCAACGACGAAACCGACG
CGCTGCCGCAGGAATATTCCTACGAGCCGGAACTCGGCCTGCGTGCGGGCGACGATGGCCTGGATCTGGTGCTGAAGATC
CTGCGCGATGCGCCGCAGCACCTCAGCGAAGACGGCCTGCTGATCTGTGAAGTGGGCGAGTCCGAGCAGCACCTGATCAA
GCTGCTGCCGGAAGTGGATTTCGCCTGGGTCGAGTTCAAGGTCGGCCAGATGGGCATCTTCGCGGTCGAATGCCGCGAGT
TGATCGCACACAGCGCGCGCATCACCGAGCTGGCCAGTGCGCGCTGA

Upstream 100 bases:

>100_bases
CCGGTATTGCGATTGAACATGGCGGTTTCCAGTGCAACGGACGCTCATGATACCGATCCGACCTCTATAATCGGGGGCCG
AACACTTCTTAGTTGTTGCC

Downstream 100 bases:

>100_bases
GGCACGCACGCACCGGCCACATCTGAGCGACATCGTGCTGCTGGTGCCGGTGTCCGTGCTCGGCATGTGCATTCCGTTCG
GATTGCTCGATGTGGTGTTT

Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTAAAADELHTIIDLIRYGTSRFNEAGLTFGHSYDNALDEATQLVLHSLHLPHDLGPAYGQARLLRAEKERVLALFQRRV
DERVPAAYLTGEAWFAGLSFKSDARALVPRSPIAELIEAGFEPWLGGREVTRALDLCTGSGCIAIAMGHYNPHWDVDGVD
ISDDALALAAENKARLHADNVSLLKSDLFTGLAGRQYDLIVTNPPYVTNDETDALPQEYSYEPELGLRAGDDGLDLVLKI
LRDAPQHLSEDGLLICEVGESEQHLIKLLPEVDFAWVEFKVGQMGIFAVECRELIAHSARITELASAR

Sequences:

>Translated_308_residues
MTAAAADELHTIIDLIRYGTSRFNEAGLTFGHSYDNALDEATQLVLHSLHLPHDLGPAYGQARLLRAEKERVLALFQRRV
DERVPAAYLTGEAWFAGLSFKSDARALVPRSPIAELIEAGFEPWLGGREVTRALDLCTGSGCIAIAMGHYNPHWDVDGVD
ISDDALALAAENKARLHADNVSLLKSDLFTGLAGRQYDLIVTNPPYVTNDETDALPQEYSYEPELGLRAGDDGLDLVLKI
LRDAPQHLSEDGLLICEVGESEQHLIKLLPEVDFAWVEFKVGQMGIFAVECRELIAHSARITELASAR
>Mature_307_residues
TAAAADELHTIIDLIRYGTSRFNEAGLTFGHSYDNALDEATQLVLHSLHLPHDLGPAYGQARLLRAEKERVLALFQRRVD
ERVPAAYLTGEAWFAGLSFKSDARALVPRSPIAELIEAGFEPWLGGREVTRALDLCTGSGCIAIAMGHYNPHWDVDGVDI
SDDALALAAENKARLHADNVSLLKSDLFTGLAGRQYDLIVTNPPYVTNDETDALPQEYSYEPELGLRAGDDGLDLVLKIL
RDAPQHLSEDGLLICEVGESEQHLIKLLPEVDFAWVEFKVGQMGIFAVECRELIAHSARITELASAR

Specific function: Unknown

COG id: COG2890

COG function: function code J; Methylase of polypeptide chain release factors

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705409, Length=274, Percent_Identity=28.8321167883212, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI87082085, Length=295, Percent_Identity=50.5084745762712, Blast_Score=277, Evalue=8e-76,
Organism=Escherichia coli, GI1787463, Length=202, Percent_Identity=32.6732673267327, Blast_Score=104, Evalue=9e-24,
Organism=Drosophila melanogaster, GI24582226, Length=213, Percent_Identity=27.6995305164319, Blast_Score=76, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR004556
- InterPro:   IPR017127
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: =2.1.1.72 [H]

Molecular weight: Translated: 33842; Mature: 33710

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAADELHTIIDLIRYGTSRFNEAGLTFGHSYDNALDEATQLVLHSLHLPHDLGPAYG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
QARLLRAEKERVLALFQRRVDERVPAAYLTGEAWFAGLSFKSDARALVPRSPIAELIEAG
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHEECCCCCCCCCCCCCCCHHHHHHHCC
FEPWLGGREVTRALDLCTGSGCIAIAMGHYNPHWDVDGVDISDDALALAAENKARLHADN
CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEECCH
VSLLKSDLFTGLAGRQYDLIVTNPPYVTNDETDALPQEYSYEPELGLRAGDDGLDLVLKI
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LRDAPQHLSEDGLLICEVGESEQHLIKLLPEVDFAWVEFKVGQMGIFAVECRELIAHSAR
HHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
ITELASAR
HHHHHCCC
>Mature Secondary Structure 
TAAAADELHTIIDLIRYGTSRFNEAGLTFGHSYDNALDEATQLVLHSLHLPHDLGPAYG
CCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHH
QARLLRAEKERVLALFQRRVDERVPAAYLTGEAWFAGLSFKSDARALVPRSPIAELIEAG
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHEECCCCCCCCCCCCCCCHHHHHHHCC
FEPWLGGREVTRALDLCTGSGCIAIAMGHYNPHWDVDGVDISDDALALAAENKARLHADN
CCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEECCH
VSLLKSDLFTGLAGRQYDLIVTNPPYVTNDETDALPQEYSYEPELGLRAGDDGLDLVLKI
HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
LRDAPQHLSEDGLLICEVGESEQHLIKLLPEVDFAWVEFKVGQMGIFAVECRELIAHSAR
HHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHH
ITELASAR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]