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The map label for this gene is ydhO [H]

Identifier: 66767858

GI number: 66767858

Start: 1842745

End: 1843488

Strand: Reverse

Name: ydhO [H]

Synonym: XC_1534

Alternate gene names: 66767858

Gene position: 1843488-1842745 (Counterclockwise)

Preceding gene: 66767859

Following gene: 66767856

Centisome position: 35.8

GC content: 68.15

Gene sequence:

>744_bases
GTGACGAACGACGAACAGCTCAACCCTGGCGCCGCACCGCATCCGCCCCGGAAACCGCTCCGCCTGTTGTGCGCCACCGC
GCTCTGGCTCGCAGCACTTCCCGCCCTGGCACAGACCGCCCCAATCCCCTCTTCCGTTCCGCCTGCGACCGCATCTGAAA
GCGCCGTCGCCGCTGAGAAAGCCGCCACCCGCAGCCGCGCCGCTGCCACTGCAACGCTGGCCGCCCTGCTTCCGCACCTG
GCTGCCAACGACGCCATTCCCCTGATGGACCGCTCGGCGATGTTCGCTGGCGACCTCAGCCGCCTGCTCGCCAACTACGA
CGTCTCGCAGAGCGCCGCCAACGCGGCACAGAACGCCGTGGCCGACAGCAAGGTCCAGGTGATCCTGCAGCGCGCAATGG
CCCTGCTGGGCACGCCGTACGTCTGGGGTGGCGAGTCCACCGAAGGCTTCGATTGCAGCGGCCTGGTCGGTTACGTGTTC
AAGACTGCGCTGGGCATCGAACTGCCGCGCGTCTCCCGTGATATCGCCCGCGATGAAACCGCCGAACTGATCAAGGACCC
GCACGCGCTCAAGGCCGGCGACCTGGTGTTCTTCGGCCGCCGCGGCCGCATCGATCATGTCGGCCTAGTGGTCGGCGACG
GCAAGTTCCTGCACGCGCCGAGCCGCGGCAAGGACGTGCGCGTGGATTCGCTGGCCAGCGGCTACTGGAGCGAAAAGTTC
ATCCAGGCGCGTCGCGTGCTCTGA

Upstream 100 bases:

>100_bases
TGAGTCACAAGTCATAAAACGGAAAGTTAACGTTTTTTGAACGTAACGAACCTTTCACCAAGGCATCATCCCGCATCGAC
AGCAGAATTGTGATTCCCGC

Downstream 100 bases:

>100_bases
TTGCCCGACCGGCTGCATAAACACGGAAAGCCGCGGCCTTGCCGCGGTTTTTTTTCGCCCCGCCGACGTTTGCGCACGAC
CCAGGGCTCGACTTGGAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MTNDEQLNPGAAPHPPRKPLRLLCATALWLAALPALAQTAPIPSSVPPATASESAVAAEKAATRSRAAATATLAALLPHL
AANDAIPLMDRSAMFAGDLSRLLANYDVSQSAANAAQNAVADSKVQVILQRAMALLGTPYVWGGESTEGFDCSGLVGYVF
KTALGIELPRVSRDIARDETAELIKDPHALKAGDLVFFGRRGRIDHVGLVVGDGKFLHAPSRGKDVRVDSLASGYWSEKF
IQARRVL

Sequences:

>Translated_247_residues
MTNDEQLNPGAAPHPPRKPLRLLCATALWLAALPALAQTAPIPSSVPPATASESAVAAEKAATRSRAAATATLAALLPHL
AANDAIPLMDRSAMFAGDLSRLLANYDVSQSAANAAQNAVADSKVQVILQRAMALLGTPYVWGGESTEGFDCSGLVGYVF
KTALGIELPRVSRDIARDETAELIKDPHALKAGDLVFFGRRGRIDHVGLVVGDGKFLHAPSRGKDVRVDSLASGYWSEKF
IQARRVL
>Mature_246_residues
TNDEQLNPGAAPHPPRKPLRLLCATALWLAALPALAQTAPIPSSVPPATASESAVAAEKAATRSRAAATATLAALLPHLA
ANDAIPLMDRSAMFAGDLSRLLANYDVSQSAANAAQNAVADSKVQVILQRAMALLGTPYVWGGESTEGFDCSGLVGYVFK
TALGIELPRVSRDIARDETAELIKDPHALKAGDLVFFGRRGRIDHVGLVVGDGKFLHAPSRGKDVRVDSLASGYWSEKFI
QARRVL

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=207, Percent_Identity=32.3671497584541, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1786421, Length=126, Percent_Identity=38.8888888888889, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788501, Length=178, Percent_Identity=31.4606741573034, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1788001, Length=114, Percent_Identity=40.3508771929825, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 26071; Mature: 25940

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNDEQLNPGAAPHPPRKPLRLLCATALWLAALPALAQTAPIPSSVPPATASESAVAAEK
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AATRSRAAATATLAALLPHLAANDAIPLMDRSAMFAGDLSRLLANYDVSQSAANAAQNAV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ADSKVQVILQRAMALLGTPYVWGGESTEGFDCSGLVGYVFKTALGIELPRVSRDIARDET
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AELIKDPHALKAGDLVFFGRRGRIDHVGLVVGDGKFLHAPSRGKDVRVDSLASGYWSEKF
HHHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHH
IQARRVL
HHHHHCC
>Mature Secondary Structure 
TNDEQLNPGAAPHPPRKPLRLLCATALWLAALPALAQTAPIPSSVPPATASESAVAAEK
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
AATRSRAAATATLAALLPHLAANDAIPLMDRSAMFAGDLSRLLANYDVSQSAANAAQNAV
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ADSKVQVILQRAMALLGTPYVWGGESTEGFDCSGLVGYVFKTALGIELPRVSRDIARDET
HHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AELIKDPHALKAGDLVFFGRRGRIDHVGLVVGDGKFLHAPSRGKDVRVDSLASGYWSEKF
HHHHCCCCCCCCCCEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHH
IQARRVL
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]