| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is oprP [H]
Identifier: 66767853
GI number: 66767853
Start: 1838274
End: 1839404
Strand: Reverse
Name: oprP [H]
Synonym: XC_1529
Alternate gene names: 66767853
Gene position: 1839404-1838274 (Counterclockwise)
Preceding gene: 66767854
Following gene: 66767852
Centisome position: 35.73
GC content: 61.27
Gene sequence:
>1131_bases ATGAAAACCACTCTACTGGTCGCACTCATGGCCTGCCTGGGCGCCATGTCGGAGGCTGCGGCAGTGGAGGTCACGGTTGG CGGGCGACTGCACCTGGACTATGCGCGGTACAACGCCGATGTCAGGCAGCTGGACAATGGCATGCTGCTGCGGCGCGCTC GCCTGGATATGGACGGCAAGCTCACCAGTGACTGGTCGTTTGAACTGGCGTACGACTTCGCCAATGTCTATGCGCTGACA AACACCGGCACCGTCAAGGACGGCGACTTCAAGGAAGGCTTCACCGACATCGCGTTGCACTACGACGGCTGGAAGCAAGC CGATCTCAACGTTGGCCAAACCAAGGTGCCGTTCGGGCTGGAGGAATTGAACAGTTCGAATGCCATCAGCTTCATTGAGC GCGCCTTGTCGACCGACGCGTTCGCGCCGTCCCGGCGGCTCGGCGCGGAAGTGAGCAGAAACCGCGATCACTACTCGGTG TCTGTGATGGGGTTCGGCTCCTCGTTCGATGGTCGCGAACGTGGACGCGGCCTTGCTGCGCGCGCGACCGTCACACCGAT TTATGCAGGCGGCGGCAACACCGTACTGCATCTTGGTATCGCTGCGGTGGTCGAGCGCCCTACCGGTGAGGTCAAGTTCA CCGCGCGTCCGGAATCTCGTGCACTGGACGTCAGATTCTTGAATACGGGCAAGTTGGCCGACGTCACCCACGTGGGCAGG CTCGGGCTGGAAGCTGCGGCGAAATCCGGCCCACTCTCCTTACAGGCAGAGTGGATGCAGACCGCGATCAAACGCGAAGG CATCGGCACGGATGCAACGCTGGAAGGCTGGTATGTGATGGGGAGTTGGGTGCTCACAGGCGAGTCGCGTCAGTACAGCA GCGGCAGATTCAAAGGTGTCCCCGTCCAACGGCCGGGCGGTGCCTGGGAAGTGACCGCGCGGTATAGCCATCTGGATCTG GACAACGCGAACGTACGGGGCGGCGAAGAAGACAATCTCACCCTGGGCGTGAACTACTACGCCAGCAAGCACCTGCGTAT CATGCTCAACTACATCGACGTGCACAGCGAACGTCGGGGCAAGGCAGACAGCCCGCAGATTCTGTTGATGCGTGCGCAGC TGGCGTTTTAA
Upstream 100 bases:
>100_bases GTTCTGCTCGCAAGCGACAACGGCGGACTGGTCACTCACGGCACGACCTTTGTGCTGCTCACACGGCCATGAGCATGGAT CGTACGGAGCTCGTGCACCC
Downstream 100 bases:
>100_bases GCCCGTACCGCACAGCCCACCGTGGAGGCAACCTTGGCAAGAACCCGAATACTCATTGTCGATGACGAAGACAGCATTCG TTTTGGCATGCGAGACTTCC
Product: polyphosphate-selective porin O
Products: NA
Alternate protein names: Outer membrane protein D1 [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKTTLLVALMACLGAMSEAAAVEVTVGGRLHLDYARYNADVRQLDNGMLLRRARLDMDGKLTSDWSFELAYDFANVYALT NTGTVKDGDFKEGFTDIALHYDGWKQADLNVGQTKVPFGLEELNSSNAISFIERALSTDAFAPSRRLGAEVSRNRDHYSV SVMGFGSSFDGRERGRGLAARATVTPIYAGGGNTVLHLGIAAVVERPTGEVKFTARPESRALDVRFLNTGKLADVTHVGR LGLEAAAKSGPLSLQAEWMQTAIKREGIGTDATLEGWYVMGSWVLTGESRQYSSGRFKGVPVQRPGGAWEVTARYSHLDL DNANVRGGEEDNLTLGVNYYASKHLRIMLNYIDVHSERRGKADSPQILLMRAQLAF
Sequences:
>Translated_376_residues MKTTLLVALMACLGAMSEAAAVEVTVGGRLHLDYARYNADVRQLDNGMLLRRARLDMDGKLTSDWSFELAYDFANVYALT NTGTVKDGDFKEGFTDIALHYDGWKQADLNVGQTKVPFGLEELNSSNAISFIERALSTDAFAPSRRLGAEVSRNRDHYSV SVMGFGSSFDGRERGRGLAARATVTPIYAGGGNTVLHLGIAAVVERPTGEVKFTARPESRALDVRFLNTGKLADVTHVGR LGLEAAAKSGPLSLQAEWMQTAIKREGIGTDATLEGWYVMGSWVLTGESRQYSSGRFKGVPVQRPGGAWEVTARYSHLDL DNANVRGGEEDNLTLGVNYYASKHLRIMLNYIDVHSERRGKADSPQILLMRAQLAF >Mature_376_residues MKTTLLVALMACLGAMSEAAAVEVTVGGRLHLDYARYNADVRQLDNGMLLRRARLDMDGKLTSDWSFELAYDFANVYALT NTGTVKDGDFKEGFTDIALHYDGWKQADLNVGQTKVPFGLEELNSSNAISFIERALSTDAFAPSRRLGAEVSRNRDHYSV SVMGFGSSFDGRERGRGLAARATVTPIYAGGGNTVLHLGIAAVVERPTGEVKFTARPESRALDVRFLNTGKLADVTHVGR LGLEAAAKSGPLSLQAEWMQTAIKREGIGTDATLEGWYVMGSWVLTGESRQYSSGRFKGVPVQRPGGAWEVTARYSHLDL DNANVRGGEEDNLTLGVNYYASKHLRIMLNYIDVHSERRGKADSPQILLMRAQLAF
Specific function: Anion specific, the binding site has higher affinity for phosphate than chloride ions. Porin O has a higher affinity for polyphosphates (tripolyphosphate and pyrophosphate) while porin P has a higher affinity for orthophosphate [H]
COG id: COG3746
COG function: function code P; Phosphate-selective porin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oprO/oprP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010870 [H]
Pfam domain/function: PF07396 Porin_O_P [H]
EC number: NA
Molecular weight: Translated: 41120; Mature: 41120
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTTLLVALMACLGAMSEAAAVEVTVGGRLHLDYARYNADVRQLDNGMLLRRARLDMDGK CCHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEHHHHCCCHHHHCCCCEEEEECCCCCCC LTSDWSFELAYDFANVYALTNTGTVKDGDFKEGFTDIALHYDGWKQADLNVGQTKVPFGL CCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCH EELNSSNAISFIERALSTDAFAPSRRLGAEVSRNRDHYSVSVMGFGSSFDGRERGRGLAA HHCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHCCCCEEEEEEEEECCCCCCHHHCCCEEE RATVTPIYAGGGNTVLHLGIAAVVERPTGEVKFTARPESRALDVRFLNTGKLADVTHVGR EEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHH LGLEAAAKSGPLSLQAEWMQTAIKREGIGTDATLEGWYVMGSWVLTGESRQYSSGRFKGV HCHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCEECCEEEEEEEEEECCCCCCCCCCCCCC PVQRPGGAWEVTARYSHLDLDNANVRGGEEDNLTLGVNYYASKHLRIMLNYIDVHSERRG CCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEHCCCCEEEEEEEEHECCCCCCC KADSPQILLMRAQLAF CCCCCEEEEEEEECCC >Mature Secondary Structure MKTTLLVALMACLGAMSEAAAVEVTVGGRLHLDYARYNADVRQLDNGMLLRRARLDMDGK CCHHHHHHHHHHHHCCCCCEEEEEEECCEEEEEHHHHCCCHHHHCCCCEEEEECCCCCCC LTSDWSFELAYDFANVYALTNTGTVKDGDFKEGFTDIALHYDGWKQADLNVGQTKVPFGL CCCCCEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCH EELNSSNAISFIERALSTDAFAPSRRLGAEVSRNRDHYSVSVMGFGSSFDGRERGRGLAA HHCCCCCHHHHHHHHHCCCCCCCCHHHCCHHHCCCCEEEEEEEEECCCCCCHHHCCCEEE RATVTPIYAGGGNTVLHLGIAAVVERPTGEVKFTARPESRALDVRFLNTGKLADVTHVGR EEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCCCEEEEEEECCCCCCCHHHHHH LGLEAAAKSGPLSLQAEWMQTAIKREGIGTDATLEGWYVMGSWVLTGESRQYSSGRFKGV HCHHHHCCCCCCEEEHHHHHHHHHHCCCCCCCEECCEEEEEEEEEECCCCCCCCCCCCCC PVQRPGGAWEVTARYSHLDLDNANVRGGEEDNLTLGVNYYASKHLRIMLNYIDVHSERRG CCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEHCCCCEEEEEEEEHECCCCCCC KADSPQILLMRAQLAF CCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1697017; 1406271; 10984043; 2456446; 2451538; 3017428 [H]