| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yjgA [C]
Identifier: 66767837
GI number: 66767837
Start: 1820776
End: 1821357
Strand: Reverse
Name: yjgA [C]
Synonym: XC_1511
Alternate gene names: 66767837
Gene position: 1821357-1820776 (Counterclockwise)
Preceding gene: 66767840
Following gene: 66767835
Centisome position: 35.38
GC content: 64.6
Gene sequence:
>582_bases ATGCGCGGACGCGATGAAGATACCGGTGAATTTCGTGGCGCCAGCCGCAGCCAGCAACGGCGCGAGGCCTTGGAAATTTT CGACCTGGGCGAAAAGCTGGTGGCGCTCACCCCGGCGCAGCTGGCCAAGTTGCCGGTGCCCGAGTCGTTGATCCCGCACA TCGAAGAGAGCAAGCGCATCACCTCGCATATCGCGCACAAGCGCCAGCTGGCGTTTCTGGCCAAGCACATGCGCCGCGAG GACGACGAAACCCTGGATGCGATCCGCGATGCGCTGGATGCCAACAGCGATACCGCGCGCCGCGAAGTGGCGGCGATTCA CCGCGTCGAACGCTGGCGCGAGCGCCTGCTCGCCGAAGGCGACGTCGCGCTGGCCGAATTGCTGGAAGCCTACCCGGCTG CCGACCGCCAGCAACTGCGTCAACTGGTGCGCAACGCGATCCACGAGCGGGCCAAGAACAAGCCGCCGCGCGCCTACCGC GAGCTGTTCCAGGTGCTGCGTGATCTGTCTCAGAAGCCCGGATTGGAGAGTGGGGATGCGGGATTGGAAGACGAAGAGTC GGCGTCGGAAAACGACGAATAA
Upstream 100 bases:
>100_bases ATCCATGGCCGCAGTGTCTGAATTTGGTGCGGAGTCTTCCGCCGGAGTCCGGCCGTTCATGGCCGGAAATTTAACTAAAC ACGTTTTGGGATGTAGTGGC
Downstream 100 bases:
>100_bases GGCTCCGCCCGATCCACCGAGCCCCGCAACGGCGATTCCTGCCGTTGCAATTCCCCATTCCCGATTCCCGATTCCCCTCT GCTGAACCGGCAAACCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRITSHIAHKRQLAFLAKHMRRE DDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYR ELFQVLRDLSQKPGLESGDAGLEDEESASENDE
Sequences:
>Translated_193_residues MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRITSHIAHKRQLAFLAKHMRRE DDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYR ELFQVLRDLSQKPGLESGDAGLEDEESASENDE >Mature_193_residues MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRITSHIAHKRQLAFLAKHMRRE DDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEGDVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYR ELFQVLRDLSQKPGLESGDAGLEDEESASENDE
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family
Homologues:
Organism=Escherichia coli, GI1790681, Length=161, Percent_Identity=39.7515527950311, Blast_Score=109, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1511_XANC8 (Q4UWJ4)
Other databases:
- EMBL: CP000050 - RefSeq: YP_242599.1 - ProteinModelPortal: Q4UWJ4 - SMR: Q4UWJ4 - STRING: Q4UWJ4 - GeneID: 3381854 - GenomeReviews: CP000050_GR - KEGG: xcb:XC_1511 - eggNOG: COG3028 - HOGENOM: HBG677712 - OMA: KAPWEEE - PhylomeDB: Q4UWJ4 - ProtClustDB: PRK05255 - BioCyc: XCAM314565:XC_1511-MONOMER - HAMAP: MF_00765 - InterPro: IPR023153 - InterPro: IPR006839 - PIRSF: PIRSF016183
Pfam domain/function: PF04751 DUF615
EC number: NA
Molecular weight: Translated: 22002; Mature: 22002
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRI CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH TSHIAHKRQLAFLAKHMRREDDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC DVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYRELFQVLRDLSQKPGLESGDA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GLEDEESASENDE CCCCCCCCCCCCC >Mature Secondary Structure MRGRDEDTGEFRGASRSQQRREALEIFDLGEKLVALTPAQLAKLPVPESLIPHIEESKRI CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCHHHHHHHHHHHHH TSHIAHKRQLAFLAKHMRREDDETLDAIRDALDANSDTARREVAAIHRVERWRERLLAEG HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC DVALAELLEAYPAADRQQLRQLVRNAIHERAKNKPPRAYRELFQVLRDLSQKPGLESGDA CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCC GLEDEESASENDE CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA