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The map label for this gene is 66767824

Identifier: 66767824

GI number: 66767824

Start: 1804459

End: 1805109

Strand: Direct

Name: 66767824

Synonym: XC_1498

Alternate gene names: NA

Gene position: 1804459-1805109 (Clockwise)

Preceding gene: 66767823

Following gene: 66767825

Centisome position: 35.05

GC content: 68.97

Gene sequence:

>651_bases
ATGATCCGATTTCCTACTGCCTTCGCCGCCTCCCTCGTGCTTGTCTCGAGCCTCACCGCCTGCGGCTTCCACCTGCGCAA
TTCGTTGGCGCTGCCGCCGGATACGCCCGCGGTCAAGGTGCAGTCGGCGTTGCAATACAGCGAGCTGGCCAAACTGCTGC
GCCGTGGCCTGAAGGCCGCCGGCGCCACCCTGGCCGACGAAGACGCCAAGAGCGGCTTTGCGCAGGTGCAGGTGTTGTCC
GAGCGCTGGGGCGATCTGCCGATCGCCATCGACAGCCAGGGCCGTGCGCAGGAGTTCAGCCTGCGCTATGCGGCGATCTT
CACGGTGACCACCGCCAACGGCGCAATCCTGGTGCCGCAGCAGGTGATCGAGCTGTCGCGTGATTACGTGTCGCCGCCGG
TGGACGCCACCGGTACCGCGACCGAGCGCGAGATCCTGGCCGACGAGCTGCGCAAGGACATGTCCGCCTCGATCCTGCGC
CGCATCGACAGCGTGGTGCGCGCCCGCGTGGAGCGCGGCGAATCGCTGGAAAGCACGCCTACCGCGCCGCTGCAGCCCAG
CACCACGCCGCCGGTGCAGCCGTCCGGCACGCCGGAGTCGAGCGTGCCGGCCTCGCTGCCGCCCGCACCGCAGCCGTCGA
ACAACAACTAA

Upstream 100 bases:

>100_bases
GCCGCAATGTAGTGCGGCGCCCTCTCAAGCCCCGTTCACGCCGTCTCGGGCAGGCTAGCCGCCTGTTGCCGCCGCCGGGG
CGCTCCTCCAGACTGTGCCC

Downstream 100 bases:

>100_bases
GCGCTCGCGCGCTTTTCGTCCATGGAACTTCGCCCAGAGCAGCTGGCCGGCCAGTCCAGCCAGCCGTTGCAGCCGGTCTA
TCTGATTGCCGGCCCGGAAA

Product: lipoprotein

Products: NA

Alternate protein names: Rare Lipoprotein B Family Protein; Rare Lipoprotein B Family; Rare Lipoprotein B

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSALQYSELAKLLRRGLKAAGATLADEDAKSGFAQVQVLS
ERWGDLPIAIDSQGRAQEFSLRYAAIFTVTTANGAILVPQQVIELSRDYVSPPVDATGTATEREILADELRKDMSASILR
RIDSVVRARVERGESLESTPTAPLQPSTTPPVQPSGTPESSVPASLPPAPQPSNNN

Sequences:

>Translated_216_residues
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSALQYSELAKLLRRGLKAAGATLADEDAKSGFAQVQVLS
ERWGDLPIAIDSQGRAQEFSLRYAAIFTVTTANGAILVPQQVIELSRDYVSPPVDATGTATEREILADELRKDMSASILR
RIDSVVRARVERGESLESTPTAPLQPSTTPPVQPSGTPESSVPASLPPAPQPSNNN
>Mature_216_residues
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSALQYSELAKLLRRGLKAAGATLADEDAKSGFAQVQVLS
ERWGDLPIAIDSQGRAQEFSLRYAAIFTVTTANGAILVPQQVIELSRDYVSPPVDATGTATEREILADELRKDMSASILR
RIDSVVRARVERGESLESTPTAPLQPSTTPPVQPSGTPESSVPASLPPAPQPSNNN

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22973; Mature: 22973

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSALQYSELAKLLRRGLKAA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GATLADEDAKSGFAQVQVLSERWGDLPIAIDSQGRAQEFSLRYAAIFTVTTANGAILVPQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHEEEEEEEEEEECCCEEECHH
QVIELSRDYVSPPVDATGTATEREILADELRKDMSASILRRIDSVVRARVERGESLESTP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TAPLQPSTTPPVQPSGTPESSVPASLPPAPQPSNNN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIRFPTAFAASLVLVSSLTACGFHLRNSLALPPDTPAVKVQSALQYSELAKLLRRGLKAA
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GATLADEDAKSGFAQVQVLSERWGDLPIAIDSQGRAQEFSLRYAAIFTVTTANGAILVPQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHEEEEEEEEEEECCCEEECHH
QVIELSRDYVSPPVDATGTATEREILADELRKDMSASILRRIDSVVRARVERGESLESTP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TAPLQPSTTPPVQPSGTPESSVPASLPPAPQPSNNN
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA