| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is arsR [C]
Identifier: 66767815
GI number: 66767815
Start: 1794866
End: 1795180
Strand: Reverse
Name: arsR [C]
Synonym: XC_1489
Alternate gene names: 66767815
Gene position: 1795180-1794866 (Counterclockwise)
Preceding gene: 66767816
Following gene: 66767814
Centisome position: 34.87
GC content: 64.44
Gene sequence:
>315_bases ATGTCGATCGATCGCATTTTCGAAGCCCTGGCATCGCGGCCACGTCGCGAGATCCTGGCCTATCTGTCGGCGCAGGAACT GACCGCTGGCCAGATCGGCGAGCGCTTTGCGATGAGTGCGCCCGCCATTTCGCGGCATCTGTCGGTGTTGTCGGCGGCTG GCCTGGTCAGCAGCGAACGGCGCGGCCAGTTCGTGGTGTACCGGCTGACCCCGCACAACATGGTCAACACGCTCAGCGGT TTCGCCTTCGAGGTCTGCCCCAAGGCCGGTCCGTTGCAACGCGAATCGCGCAAGCTGGCCAAGAAACCGCGCTGA
Upstream 100 bases:
>100_bases GACGCTCCCAGCTCGACCCGCCAGTAAAAATCGCTTGACACCTCGCACACCAAGCGAGTTAATTAGTTAATTAGCTAATT CGTTAATTAGCTAAGCCATC
Downstream 100 bases:
>100_bases ATTCCGCTCTTCGTCATGACTGCAAGGATTGCCATGTACCCACAACAGGTTGTTGCCGAAGCGAGCTTCCCCCGCGTGTT GCTGCCCTCCTGCAGCGGCG
Product: transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Transcriptional Regulator; HTH Domain Family
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MSIDRIFEALASRPRREILAYLSAQELTAGQIGERFAMSAPAISRHLSVLSAAGLVSSERRGQFVVYRLTPHNMVNTLSG FAFEVCPKAGPLQRESRKLAKKPR
Sequences:
>Translated_104_residues MSIDRIFEALASRPRREILAYLSAQELTAGQIGERFAMSAPAISRHLSVLSAAGLVSSERRGQFVVYRLTPHNMVNTLSG FAFEVCPKAGPLQRESRKLAKKPR >Mature_103_residues SIDRIFEALASRPRREILAYLSAQELTAGQIGERFAMSAPAISRHLSVLSAAGLVSSERRGQFVVYRLTPHNMVNTLSGF AFEVCPKAGPLQRESRKLAKKPR
Specific function: Transcriptional Repressor For The Arsefg Operon. Arse Is A Trans-Acting Regulatory Protein Which Controls Its Own Expression. The Repressive Effect Of Arse Is Alleviated By Oxyions Of +III Oxidation State Of Arsenic, Antimony, And Bismuth, As Well As Arse
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11514; Mature: 11382
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDRIFEALASRPRREILAYLSAQELTAGQIGERFAMSAPAISRHLSVLSAAGLVSSER CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC RGQFVVYRLTPHNMVNTLSGFAFEVCPKAGPLQRESRKLAKKPR CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC >Mature Secondary Structure SIDRIFEALASRPRREILAYLSAQELTAGQIGERFAMSAPAISRHLSVLSAAGLVSSER CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC RGQFVVYRLTPHNMVNTLSGFAFEVCPKAGPLQRESRKLAKKPR CCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA