| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yecE [C]
Identifier: 66767805
GI number: 66767805
Start: 1782462
End: 1783289
Strand: Reverse
Name: yecE [C]
Synonym: XC_1479
Alternate gene names: 66767805
Gene position: 1783289-1782462 (Counterclockwise)
Preceding gene: 66767811
Following gene: 77761151
Centisome position: 34.64
GC content: 66.91
Gene sequence:
>828_bases ATGACCGATCTGTTCGCTGCAGCGCCCCCTGCCCTGGAAGGCATCCATGTCGGCATTGGCGGTTGGGTGTACGCACCGTG GCGCGCCGGCATGTTCTATCCCGAGGGCCTGGTGCAGCGCCGGGAGCTGGAATACGCCAGCCGCCATGTCACCGCGATCG AAATCAACGGCACGTACTACGGTGCGCAGAAACCGGCGACCTACGCGAAGTGGCGCGACGAGGTGCCACCGGGCTTTGTG TTCTCGGCCAAGGCGCCGAGGCGTATCACCCAATCACGCACGCTGGCTGGCACCGGCGCGCAGGTGGAGGACTTCATCGG TGGCATTGCCGAGCTGGGCGACACACTCGGGCCGCTGGTGTGGCAATTCGAACAAGGCCATCGCCTGCAGCCCGATGACC TGGAGGGGTTCCTGTCGCTGTTGCCCAAGCGCGCTGGCAGCCGCGTGCTACGGCACGTGCTGGAGATCCGTGACCACGCC GCCGTGGATTCCGCGCTCATCGCGCGGGTGCGCCAACATGGCGTGGCCACGGTGTTCACTGATTCTGACGAACACCCCTC GTTTGCCGCTCTCTCCACGGATTTTGTGTATGCACGGCTGATGCGCAGCCAGGCACGCCTGCACACCGGTTATCCGGCAC CTGCGCTGGCGCAGTGGGCCGAGCGCATCCAGGCCTGGCGACGCGGCGAAGACCCGGCCGATCTTCCGCATGTCGGCGAT GCACCGGCGCCGGCCACTGCGCGCGAGGTGTTCGTGTTCTTCATCAGCGCAGCCAAGGAGCGCAACCCGGCTGCGGCGAT GGCGCTGCTGCAGGCGCTGGGACGCTAG
Upstream 100 bases:
>100_bases GCCAGCGTCTCGCGGCGGCGGCGGTATCATCGGTCACTTGCAGCGATCGCAGTTCCGGCACATCGCGGCATGCCCCCCCC TCGCCACTGCGGAGCCCGCC
Downstream 100 bases:
>100_bases CGGCGCGCAACGCGCTGCGGCGCAGCTCAGGCATTACGGGTGCGGTCGTTGTGCCAGCGGCCGGCCGCTACACGCGCGGC AACGGCAACGGCCACTGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTDLFAAAPPALEGIHVGIGGWVYAPWRAGMFYPEGLVQRRELEYASRHVTAIEINGTYYGAQKPATYAKWRDEVPPGFV FSAKAPRRITQSRTLAGTGAQVEDFIGGIAELGDTLGPLVWQFEQGHRLQPDDLEGFLSLLPKRAGSRVLRHVLEIRDHA AVDSALIARVRQHGVATVFTDSDEHPSFAALSTDFVYARLMRSQARLHTGYPAPALAQWAERIQAWRRGEDPADLPHVGD APAPATAREVFVFFISAAKERNPAAAMALLQALGR
Sequences:
>Translated_275_residues MTDLFAAAPPALEGIHVGIGGWVYAPWRAGMFYPEGLVQRRELEYASRHVTAIEINGTYYGAQKPATYAKWRDEVPPGFV FSAKAPRRITQSRTLAGTGAQVEDFIGGIAELGDTLGPLVWQFEQGHRLQPDDLEGFLSLLPKRAGSRVLRHVLEIRDHA AVDSALIARVRQHGVATVFTDSDEHPSFAALSTDFVYARLMRSQARLHTGYPAPALAQWAERIQAWRRGEDPADLPHVGD APAPATAREVFVFFISAAKERNPAAAMALLQALGR >Mature_274_residues TDLFAAAPPALEGIHVGIGGWVYAPWRAGMFYPEGLVQRRELEYASRHVTAIEINGTYYGAQKPATYAKWRDEVPPGFVF SAKAPRRITQSRTLAGTGAQVEDFIGGIAELGDTLGPLVWQFEQGHRLQPDDLEGFLSLLPKRAGSRVLRHVLEIRDHAA VDSALIARVRQHGVATVFTDSDEHPSFAALSTDFVYARLMRSQARLHTGYPAPALAQWAERIQAWRRGEDPADLPHVGDA PAPATAREVFVFFISAAKERNPAAAMALLQALGR
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30177; Mature: 30045
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLFAAAPPALEGIHVGIGGWVYAPWRAGMFYPEGLVQRRELEYASRHVTAIEINGTYY CCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCEEE GAQKPATYAKWRDEVPPGFVFSAKAPRRITQSRTLAGTGAQVEDFIGGIAELGDTLGPLV CCCCCCHHHHHHCCCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WQFEQGHRLQPDDLEGFLSLLPKRAGSRVLRHVLEIRDHAAVDSALIARVRQHGVATVFT HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE DSDEHPSFAALSTDFVYARLMRSQARLHTGYPAPALAQWAERIQAWRRGEDPADLPHVGD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC APAPATAREVFVFFISAAKERNPAAAMALLQALGR CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure TDLFAAAPPALEGIHVGIGGWVYAPWRAGMFYPEGLVQRRELEYASRHVTAIEINGTYY CCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCEEE GAQKPATYAKWRDEVPPGFVFSAKAPRRITQSRTLAGTGAQVEDFIGGIAELGDTLGPLV CCCCCCHHHHHHCCCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WQFEQGHRLQPDDLEGFLSLLPKRAGSRVLRHVLEIRDHAAVDSALIARVRQHGVATVFT HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE DSDEHPSFAALSTDFVYARLMRSQARLHTGYPAPALAQWAERIQAWRRGEDPADLPHVGD CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC APAPATAREVFVFFISAAKERNPAAAMALLQALGR CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA