| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is ybcJ [C]
Identifier: 66767798
GI number: 66767798
Start: 1771948
End: 1772190
Strand: Reverse
Name: ybcJ [C]
Synonym: XC_1472
Alternate gene names: 66767798
Gene position: 1772190-1771948 (Counterclockwise)
Preceding gene: 66767799
Following gene: 66767797
Centisome position: 34.42
GC content: 63.79
Gene sequence:
>243_bases ATGCAATTTCTGGAATTCGACCTGGACGGCGAGTACATCGAGCTCAACCAGCTACTCAAGCTGGCCGGCATCGCCGACAG CGGTGGCCAGGGCAAGGCGATCGTCGCCAGTGGCGCGGTCAGCGTCGATGGTGTGCAGGAGCTGCGCAAGACCGCCAAGA TCCGGCCGGGCCAACTGGTGCAGTTGGATGACGTGGAGATCCGGGTGCTGGCGATGGATCCAGAGGCGGACCCGGCGGAA TGA
Upstream 100 bases:
>100_bases ACGCACAGAACGCCTCGCCAGTACACCCACGTCATTGCGCAGTGGTGTTGCCAGCCGCTCCAGGCGGATAATCGCCCCCC TCCCTGTCACCGAGCACACC
Downstream 100 bases:
>100_bases CAGTGGGCAGGTGAGCTGGCGCACCATCGCGCGCTCGGCCGACGACCCGGAGCGCGATGTCTGCAGTGTTTCGATTGCGG CCGATTCGGCCACACCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLDDVEIRVLAMDPEADPAE
Sequences:
>Translated_80_residues MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLDDVEIRVLAMDPEADPAE >Mature_80_residues MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLVQLDDVEIRVLAMDPEADPAE
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8568; Mature: 8568
Theoretical pI: Translated: 3.97; Mature: 3.97
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLV CCEEEECCCCCEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEE QLDDVEIRVLAMDPEADPAE EECCCEEEEEEECCCCCCCC >Mature Secondary Structure MQFLEFDLDGEYIELNQLLKLAGIADSGGQGKAIVASGAVSVDGVQELRKTAKIRPGQLV CCEEEECCCCCEEEHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEE QLDDVEIRVLAMDPEADPAE EECCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA