| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767754
Identifier: 66767754
GI number: 66767754
Start: 1722556
End: 1723647
Strand: Direct
Name: 66767754
Synonym: XC_1428
Alternate gene names: NA
Gene position: 1722556-1723647 (Clockwise)
Preceding gene: 66767753
Following gene: 66767755
Centisome position: 33.46
GC content: 67.03
Gene sequence:
>1092_bases ATGTCCAAGAAAACCTTGATCCCGCATAGCGTCCGCCTGGAATTTGCGCCTGGCGCGCTGGTGCACAGCAATCTTTCCGG CGCTGCCTTCACCGACGATTGGCTGTGGGTGGCCGGCGATGAAGCCTGTGCGGTGGACCGCCTGCGCACGCTCGCCCCGC TGCAGCGCGAGACGCTGCGCTTTGGCGAAGGCCAGAGCTTTCCGCTGGCGGAGTTGCTGGATCTGCCCGGCGAAGCAGCC GAGGAAGCCGACCTGGAAGGCCTGGCACTTTCCGACGGCTTTTTGTGGGTGATCGGCTCGCATGGGCTCAAGCGCAAGAA CGCCAAGCCTGGCCGCGACGATGCCGAAAATGCCAAGCGGCTGACCAAGCTCAAGCTCGATGCCAACCGCCGCCTGCTGG CCTGCCTGCCGATCGAGCGCGCTGCCGATGGCACGCCCACGCTGGTGCGCGAAGCCGCCGACGGCCGCCGCGCGCTGCGG CTCAAGGGCGACGCCAAGCACAACCAGCTCACCGCGCTGCTGGAAGACGACCCGCATTTCGGGCCGTTTTTGAAGATTCC CGGCAAGGACAACGGCTTCGACATCGAAGGCATCGTGGTGGACGGCCAGCGCCTGCTACTGGGCCTGCGTGGCCCGGTGT TGCGTGGGTGGTCGGCGCTGCTGGAGATCCAGGTGGAAGCGCATGGCGATCATCTGCGCCTTGCCCCGCTGGATGAAGAG GGCACGCTGCTGCGCAAGCACTTCCTGCAACTGGGCGGGCTGGGCGTGCGTGACCTGCACTATTCCGGTGACGACCTGTA TCTGCTGGCCGGGCCCACCATGGTGCTCAATGGCGAGATCCGCCTGTTCAAGTGGCCGGATGCGCGCAGCGTGCTGGCCG CCAACCAGGCGCCGGTGCGCTTCCAGCGCGAGCTGCTCACGTCGGTGGTGCTGCCGCACGGCGAAGACAGCGACCGCGCC GAAGCCATCTGCAACCTGCCGCGCCAGTTGGCCGGCAACACGCCAAGCTGGCTGGTGCTCTACGACGCCCCCGGCGCCAA GCGCAGCGGCGGCGATTGCGTGGTTTACGGCGACCTGTTGCGCAACACCTGA
Upstream 100 bases:
>100_bases GGTGGATGCGTAGCGCTTCCCATGCGCGCCGCGCCACCGGCCACGCGCCCGTGGGAGTCAGCCGCCTGGCAACTCCCGCC CGCCACCGACCAGGTCACCC
Downstream 100 bases:
>100_bases GCGGGCGGGCCGGGCAGGGCACGGCTGCGCAAGGTAAAATCGGGCCACTCCCGTTCCGCCGAGCGCTCCATGACCTGCCG CACCCGTTTTGCCCCCAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MSKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRTLAPLQRETLRFGEGQSFPLAELLDLPGEAA EEADLEGLALSDGFLWVIGSHGLKRKNAKPGRDDAENAKRLTKLKLDANRRLLACLPIERAADGTPTLVREAADGRRALR LKGDAKHNQLTALLEDDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWSALLEIQVEAHGDHLRLAPLDEE GTLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARSVLAANQAPVRFQRELLTSVVLPHGEDSDRA EAICNLPRQLAGNTPSWLVLYDAPGAKRSGGDCVVYGDLLRNT
Sequences:
>Translated_363_residues MSKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRTLAPLQRETLRFGEGQSFPLAELLDLPGEAA EEADLEGLALSDGFLWVIGSHGLKRKNAKPGRDDAENAKRLTKLKLDANRRLLACLPIERAADGTPTLVREAADGRRALR LKGDAKHNQLTALLEDDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWSALLEIQVEAHGDHLRLAPLDEE GTLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARSVLAANQAPVRFQRELLTSVVLPHGEDSDRA EAICNLPRQLAGNTPSWLVLYDAPGAKRSGGDCVVYGDLLRNT >Mature_362_residues SKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRTLAPLQRETLRFGEGQSFPLAELLDLPGEAAE EADLEGLALSDGFLWVIGSHGLKRKNAKPGRDDAENAKRLTKLKLDANRRLLACLPIERAADGTPTLVREAADGRRALRL KGDAKHNQLTALLEDDPHFGPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWSALLEIQVEAHGDHLRLAPLDEEG TLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARSVLAANQAPVRFQRELLTSVVLPHGEDSDRAE AICNLPRQLAGNTPSWLVLYDAPGAKRSGGDCVVYGDLLRNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39641; Mature: 39510
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRTLAPLQRETLR CCCCCCCCCEEEEEECCCEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHH FGEGQSFPLAELLDLPGEAAEEADLEGLALSDGFLWVIGSHGLKRKNAKPGRDDAENAKR CCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHH LTKLKLDANRRLLACLPIERAADGTPTLVREAADGRRALRLKGDAKHNQLTALLEDDPHF HEEEEECCCCEEEEEECCHHCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCC GPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWSALLEIQVEAHGDHLRLAPLDEE CCEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHCCEEEEEEEEEECCCEEEEEECCCC GTLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARSVLAANQAPVR CHHHHHHHHHHCCCCEEEEEECCCEEEEEECCEEEEECEEEEEECCCCCCEEECCCCCHH FQRELLTSVVLPHGEDSDRAEAICNLPRQLAGNTPSWLVLYDAPGAKRSGGDCVVYGDLL HHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCCEEEEHHHH RNT HCC >Mature Secondary Structure SKKTLIPHSVRLEFAPGALVHSNLSGAAFTDDWLWVAGDEACAVDRLRTLAPLQRETLR CCCCCCCCEEEEEECCCEEEECCCCCCEECCCEEEEECCCHHHHHHHHHHHHHHHHHHH FGEGQSFPLAELLDLPGEAAEEADLEGLALSDGFLWVIGSHGLKRKNAKPGRDDAENAKR CCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHH LTKLKLDANRRLLACLPIERAADGTPTLVREAADGRRALRLKGDAKHNQLTALLEDDPHF HEEEEECCCCEEEEEECCHHCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCCC GPFLKIPGKDNGFDIEGIVVDGQRLLLGLRGPVLRGWSALLEIQVEAHGDHLRLAPLDEE CCEEECCCCCCCEEEEEEEECCCEEEEECCCCHHHCCEEEEEEEEEECCCEEEEEECCCC GTLLRKHFLQLGGLGVRDLHYSGDDLYLLAGPTMVLNGEIRLFKWPDARSVLAANQAPVR CHHHHHHHHHHCCCCEEEEEECCCEEEEEECCEEEEECEEEEEECCCCCCEEECCCCCHH FQRELLTSVVLPHGEDSDRAEAICNLPRQLAGNTPSWLVLYDAPGAKRSGGDCVVYGDLL HHHHHHHHHHCCCCCCCHHHHHHHCCHHHHCCCCCCEEEEECCCCCCCCCCCEEEEHHHH RNT HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA