| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yieH [H]
Identifier: 66767722
GI number: 66767722
Start: 1684712
End: 1685389
Strand: Direct
Name: yieH [H]
Synonym: XC_1396
Alternate gene names: 66767722
Gene position: 1684712-1685389 (Clockwise)
Preceding gene: 66767719
Following gene: 66767725
Centisome position: 32.72
GC content: 66.67
Gene sequence:
>678_bases ATGGCGTACGAGCTACTGATCAGTGACTGCGATGGGGTTCTTGTCGACAGCGAAATCCTGGCCGACCGGGTAATGCGTGA GGCGCTGGCAGCGTTCGTGCCGGCCGAGCCGTTGGAACATCTGCTGGAAACCACGTTCGGGCAGACCACGCGCGAGGTAT TGCGGCGGGTGGAAGAACACTTTGCGCTGCAGTTGCCGGAAACCTTGCTGGCGCAGATCCAGGCGCGCAGCGAAGCCTTG ATCGCCGCCGAGGTGCAGCCGATTGCGGGCGTGCGACAGGCGCTGGAGCAGATCCCGCTGCCGCTGGCGGTGGCCTCCAA TAGCCGCCGCCACAACGTGATTGCATCGGTGGAGCGGGCCGGGCTCACGGCGCGTGCGGCAGGGCGGATCTTCAGCGCCG ACATGGTGGAGCGGCCCAAGCCCGCACCGGATGTTTACCTGCTGGCCGCGCGCACGGCCGGTGTAGCACCGGAGCGTTGC CTGGTCATCGAAGACAGCCCCACCGGTGCGACCGCCGCGCTGGCGGCCGGCATGCAGGTGCTGGGCTTTACCGGTGCCAG CCATATTCCGCAAGGGCACGGCGACACCCTGCGACGGATCGGCGTGCTGGAGGTGTTCGACGATATGCGCGATTTGCACG CATTGTTCGAGCGGCTCGCGCAAACGCGCGCTGGTTGA
Upstream 100 bases:
>100_bases ACGGGCGCGCGGGCGTCTTCGTCCCCTGTGCGGGCGCTGCGCCACAGCCGACGGTCACGACCGGGTCGGCATAATGGCGC TTTGCAAGCAGATGGGTGCA
Downstream 100 bases:
>100_bases GGGTGTCGCGTCGTTGCTTCGTTTGGCTGCAGTCAGTGCTTGGATCAAAAGTCTGGTCGGTCGCGCGTGCGGTGCCCTCA CCGCTTGCGGACACGCCGCA
Product: hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MAYELLISDCDGVLVDSEILADRVMREALAAFVPAEPLEHLLETTFGQTTREVLRRVEEHFALQLPETLLAQIQARSEAL IAAEVQPIAGVRQALEQIPLPLAVASNSRRHNVIASVERAGLTARAAGRIFSADMVERPKPAPDVYLLAARTAGVAPERC LVIEDSPTGATAALAAGMQVLGFTGASHIPQGHGDTLRRIGVLEVFDDMRDLHALFERLAQTRAG
Sequences:
>Translated_225_residues MAYELLISDCDGVLVDSEILADRVMREALAAFVPAEPLEHLLETTFGQTTREVLRRVEEHFALQLPETLLAQIQARSEAL IAAEVQPIAGVRQALEQIPLPLAVASNSRRHNVIASVERAGLTARAAGRIFSADMVERPKPAPDVYLLAARTAGVAPERC LVIEDSPTGATAALAAGMQVLGFTGASHIPQGHGDTLRRIGVLEVFDDMRDLHALFERLAQTRAG >Mature_224_residues AYELLISDCDGVLVDSEILADRVMREALAAFVPAEPLEHLLETTFGQTTREVLRRVEEHFALQLPETLLAQIQARSEALI AAEVQPIAGVRQALEQIPLPLAVASNSRRHNVIASVERAGLTARAAGRIFSADMVERPKPAPDVYLLAARTAGVAPERCL VIEDSPTGATAALAAGMQVLGFTGASHIPQGHGDTLRRIGVLEVFDDMRDLHALFERLAQTRAG
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates phosphoenolpyruvate and AMP [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Escherichia coli, GI1790151, Length=187, Percent_Identity=27.807486631016, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789046, Length=179, Percent_Identity=31.8435754189944, Blast_Score=63, Evalue=2e-11, Organism=Drosophila melanogaster, GI17137324, Length=183, Percent_Identity=31.1475409836066, Blast_Score=71, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24258; Mature: 24127
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYELLISDCDGVLVDSEILADRVMREALAAFVPAEPLEHLLETTFGQTTREVLRRVEEH CCCEEEEECCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH FALQLPETLLAQIQARSEALIAAEVQPIAGVRQALEQIPLPLAVASNSRRHNVIASVERA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH GLTARAAGRIFSADMVERPKPAPDVYLLAARTAGVAPERCLVIEDSPTGATAALAAGMQV CCHHHHHCCHHHHHHHCCCCCCCCEEEEEEHHCCCCCCEEEEEECCCCCHHHHHHHHHHH LGFTGASHIPQGHGDTLRRIGVLEVFDDMRDLHALFERLAQTRAG HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AYELLISDCDGVLVDSEILADRVMREALAAFVPAEPLEHLLETTFGQTTREVLRRVEEH CCEEEEECCCCEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH FALQLPETLLAQIQARSEALIAAEVQPIAGVRQALEQIPLPLAVASNSRRHNVIASVERA HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHH GLTARAAGRIFSADMVERPKPAPDVYLLAARTAGVAPERCLVIEDSPTGATAALAAGMQV CCHHHHHCCHHHHHHHCCCCCCCCEEEEEEHHCCCCCCEEEEEECCCCCHHHHHHHHHHH LGFTGASHIPQGHGDTLRRIGVLEVFDDMRDLHALFERLAQTRAG HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]