Click here to switch to the map view.

The map label for this gene is yagQ [H]

Identifier: 66767715

GI number: 66767715

Start: 1677342

End: 1678316

Strand: Direct

Name: yagQ [H]

Synonym: XC_1388

Alternate gene names: 66767715

Gene position: 1677342-1678316 (Clockwise)

Preceding gene: 66767714

Following gene: 66767716

Centisome position: 32.58

GC content: 68.82

Gene sequence:

>975_bases
ATGCCGGCTGCCACCGCGTGGCCGGCCTGGCCGGAGTACGCCCTGCACGATGATCTGTTGCCGACGTTGTCCGCCTGGCA
CCGCGCCGGCCAGCGCGTGGCGCTGGCCACGCTGGTGGAGGTGCGCGGCTCCTCGCCGCGCCCGCTCGGCAGCCAGATGG
CGATCAGCAGCAGCGGACAGGTGGCCGGGTATGTGTCGGGCGGTTGCGTTGAAGCGGCGGTCGCGCATGAAGCCCTGGCG
GTCCTGCAGGATGGCTGCCCGCGCTTGCTCGATTACGGCGAAGGCAGCGAGGTGCTCGATATCCAGCTGAGCTGCGGTGG
GCGCATCGGCGTGCTGGTGTGTGCGGTGCAGGATCTGGGCGGGTATCTCGCGCGTTGGCGCAATGCGCGCCAGCACCGTC
GCGCGTTTCATGTTGCGCTGGATCGCATGCACGGCACGCTGCGTTACCTGGCTACACCGAGTGATGCCACTCCCGGCGAA
TTCGTGATCTCGCGGCCGCCGCCGCTGCGGCTGGTGCTGGTGGGTGCGGATCCGTCGGTACTGGCGCTGGTCGCGCTGGC
GACGCAGGCCGGGATCGAAGTGCGCGTACTGCGCCCGCATGGCCCGGTCGAACCGCCATCGGGGCTGGCCCCAGAGCACT
ACGATCGCCGTGGTCTTGCGCAGGCGTTGGCAGAGGTGGAACTGGACGCACACTGCGCGTTGTACAGCCTTGCCCACGAC
GGCGACATCGATTTGCAGGTTGCCCATCACGGCCTGTCGTCTCAGGTGGCCTGCATCGGCATCCTGGGTAGTCGCAATAA
ACGGCAGGCACGATTGCAGGCCCTGCGCGCGCTCGGTCATGACGATGCCGCACTGGAACGCGTGCGCCTGCCGGCCGGCA
TCCGCCTGGGGCCGTCGTCGCCGCATGGCATCGCGCTTGGCATCATCGCCGAAGCCACGCAAGCAGTGGCCGATCTCCAG
GCTGCAGCGCTTTAG

Upstream 100 bases:

>100_bases
TGCGCGTACGCGACTACCCGGTGACGCTGGACAAGCTGCTGCCACACCTGCCTGAGCCGCTGCGCGCGTGAATGCAGTGG
CGGCTCCTGTCAGCCACGGT

Downstream 100 bases:

>100_bases
GATCTTTCGTTTTTTTCGAGCCCTGGGCGCATTGCGCGTAGGGCGGCATGCGCAAGCCTGGGTTGCTGCCAGCGTGATCG
CCGGGCGTTGCCTCGGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MPAATAWPAWPEYALHDDLLPTLSAWHRAGQRVALATLVEVRGSSPRPLGSQMAISSSGQVAGYVSGGCVEAAVAHEALA
VLQDGCPRLLDYGEGSEVLDIQLSCGGRIGVLVCAVQDLGGYLARWRNARQHRRAFHVALDRMHGTLRYLATPSDATPGE
FVISRPPPLRLVLVGADPSVLALVALATQAGIEVRVLRPHGPVEPPSGLAPEHYDRRGLAQALAEVELDAHCALYSLAHD
GDIDLQVAHHGLSSQVACIGILGSRNKRQARLQALRALGHDDAALERVRLPAGIRLGPSSPHGIALGIIAEATQAVADLQ
AAAL

Sequences:

>Translated_324_residues
MPAATAWPAWPEYALHDDLLPTLSAWHRAGQRVALATLVEVRGSSPRPLGSQMAISSSGQVAGYVSGGCVEAAVAHEALA
VLQDGCPRLLDYGEGSEVLDIQLSCGGRIGVLVCAVQDLGGYLARWRNARQHRRAFHVALDRMHGTLRYLATPSDATPGE
FVISRPPPLRLVLVGADPSVLALVALATQAGIEVRVLRPHGPVEPPSGLAPEHYDRRGLAQALAEVELDAHCALYSLAHD
GDIDLQVAHHGLSSQVACIGILGSRNKRQARLQALRALGHDDAALERVRLPAGIRLGPSSPHGIALGIIAEATQAVADLQ
AAAL
>Mature_323_residues
PAATAWPAWPEYALHDDLLPTLSAWHRAGQRVALATLVEVRGSSPRPLGSQMAISSSGQVAGYVSGGCVEAAVAHEALAV
LQDGCPRLLDYGEGSEVLDIQLSCGGRIGVLVCAVQDLGGYLARWRNARQHRRAFHVALDRMHGTLRYLATPSDATPGEF
VISRPPPLRLVLVGADPSVLALVALATQAGIEVRVLRPHGPVEPPSGLAPEHYDRRGLAQALAEVELDAHCALYSLAHDG
DIDLQVAHHGLSSQVACIGILGSRNKRQARLQALRALGHDDAALERVRLPAGIRLGPSSPHGIALGIIAEATQAVADLQA
AAL

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=285, Percent_Identity=31.2280701754386, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 34133; Mature: 34002

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAATAWPAWPEYALHDDLLPTLSAWHRAGQRVALATLVEVRGSSPRPLGSQMAISSSGQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCC
VAGYVSGGCVEAAVAHEALAVLQDGCPRLLDYGEGSEVLDIQLSCGGRIGVLVCAVQDLG
EEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCEEEEEEEHHHHH
GYLARWRNARQHRRAFHVALDRMHGTLRYLATPSDATPGEFVISRPPPLRLVLVGADPSV
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCHHH
LALVALATQAGIEVRVLRPHGPVEPPSGLAPEHYDRRGLAQALAEVELDAHCALYSLAHD
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC
GDIDLQVAHHGLSSQVACIGILGSRNKRQARLQALRALGHDDAALERVRLPAGIRLGPSS
CCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCC
PHGIALGIIAEATQAVADLQAAAL
CCCEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAATAWPAWPEYALHDDLLPTLSAWHRAGQRVALATLVEVRGSSPRPLGSQMAISSSGQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCC
VAGYVSGGCVEAAVAHEALAVLQDGCPRLLDYGEGSEVLDIQLSCGGRIGVLVCAVQDLG
EEEEECCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEEEEEECCCCEEEEEEEHHHHH
GYLARWRNARQHRRAFHVALDRMHGTLRYLATPSDATPGEFVISRPPPLRLVLVGADPSV
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCEEEECCCCEEEEEECCCHHH
LALVALATQAGIEVRVLRPHGPVEPPSGLAPEHYDRRGLAQALAEVELDAHCALYSLAHD
HHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCC
GDIDLQVAHHGLSSQVACIGILGSRNKRQARLQALRALGHDDAALERVRLPAGIRLGPSS
CCEEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECCCC
PHGIALGIIAEATQAVADLQAAAL
CCCEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]