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The map label for this gene is yagR [H]

Identifier: 66767714

GI number: 66767714

Start: 1675105

End: 1677312

Strand: Direct

Name: yagR [H]

Synonym: XC_1387

Alternate gene names: 66767714

Gene position: 1675105-1677312 (Clockwise)

Preceding gene: 66767713

Following gene: 66767715

Centisome position: 32.53

GC content: 65.08

Gene sequence:

>2208_bases
ATGAAATTCGACACTCCCGCCGGTACCAATCCCATCGACCAGGGCAAGATCGTCGGCAAGCCGGTCGACCGCATCGACGG
CCCGCTCAAGACCACCGGCATGGCGCCGTACGCGTATGAGCATCATGATCTGCCCGGCAAGGCGGCCTATGGCCACGTGG
TCGGCGCCGGCATTGCCAAGGGCACGATTCGCAGTATTGATTTGAGCGCTGCGCGCAATGCGCCCGGCGTGCTCGGCATC
GTCACCGCGCAAAACGCCGGCAAGCTGCAAAAGGGCAAGCTCAATACGGCCAAGTTGTTGGGTGGCCCGGAGATTCAGCA
CTATCACCAGGCAATTGCGGTGGTGGTGGCGGAGACATTTGAGCAGGCACGCGCGGCCGGACAGTTGATCAAGGTGGACT
ACGGCCGCCACGTGGGCGAATACGATCTGGCACGCGCACGTCCCAAGGCCGAGGTCACCAAGGAAGGCGGTGCACCGAAC
AGCACTGTCGGCGATTTTGCCGGTGCGTTTGCGGCCGCACCGGTGCAGCTGGATGCCGAATACACCACGCCCGATCATTC
CCACGCGATGATGGAGCCGCATGCCTCCATCGCCATGTGGGAAGGCGACAAGCTCAATGTCTGGACCTCCAACCAGATGA
TCAACTGGGGTGCCGGCGATCTGGCACGCACGCTCGGTCTTCCGCCGGAAAACGTGCGCCTGATGTCGCCGTATATCGGG
GGTGGGTTCGGCGGCAAGTTGTTCCTGCGTGCCGACGCCGTGCTTGCTGCACTGGCCGCGCGCCAGGTGAAGCGGCCGGT
GAAGGTGATGCTGTCGCGGCCGTTGATTGCCAACAACACCACCCATCGCCCGGCGACCGTGCAGCGCATCCGCATCGGCG
CGCAGCGCGACGGGAAGATCACTGCCATTGCGCATGAGAGCTGGTCGGGCGATCTGCCTGGCGGTGCACCGGAAATTGCT
GCCTCACAGACGCAGTTGTTGTATGCCGGTGCCAATCGCCTGATCACCACACGCCTGGCCGTGCTGGACCTTCCCGAAGG
CAACGCCATGCGCGCGCCTGGCGAGGCACCGGGATTGATGGCGCTGGAAGTGGCCATGGACGAAATGGCCGAGAAGCTGG
CCATGGACCCGGTGAAGTTCCGCGTCGTCAACGACACCCAGGTGGATCCCGAAAACCCGCAGCGGCCGTTTTCGCAGCGG
CAGCTGGTCAAGTGCCTGGAAGACGGGGCAAAACAATTTGGCTGGTCCAAGCGCAAGGCCAAACCCGGCAGCACCCGTGA
TGGGCGCTGGCTGGTGGGCATGGGCGTGGCGTCGGCATTCCGCAACGCGATCGCCACCACCTCCGGTGCACGCATGCGCC
TGGAGCAGGGCGGCCGCGTGGTGGTGGAAACCGACATGACCGATATCGGTACCGGCTCTTACACCATCATTGCGCAGACG
GCCGCCGAGATGCTCGGCGTGCCGCTGGACTGGGTAGACGTGCGCCTGGGCGATTCGAGCTTTCCTGTCTCGGCCGGTTC
CGGCGGGCAGTGGGGCGCCAACAGTTCCACCGCCGGCGTGTATGCGGCGGCGGTGAAACTGCGCGAGGCCATCGCCACGC
AACTGGGCCTGGATCCAAGCAAGGCCGAATTTGCCGACGGGCACGTGCGTGCCGGCGGCAAGCGCATCGCCTTGGGTGAT
GCCGCTGCCCAGGGGCCGCTGGTGGTCGAGGACAAGATCGAGTTTGGCGACCTGGCCAAGAAGCAGCAGTTGTCCACCTT
CGGCGCGCATTTTGTCGAGGTCGGCGTGGACGTGGTGACCGCCGAAGTGCGCATCCGGCGCATGCTGGCCGTGTGTGCGG
CCGGGCGCATCCTCAACCCCAAGACCGCACGCAGCCAGGTGATTGGCGCGATGACCATGGGTGCCGGCTCGGCGTTGATG
GAAGAGTTGGTGGTCGACAAGCGGTTGGGCTTTTTCGTCAACCACGACCTGGCCGGCTATGAAGTGCCGGTGCATGCGGA
CATCCCGCATCAGGACGTGGTGTTCCTGGAAGAAACCGACCCGATGTCCTCGCCGATGAAGGCCAAGGGCGTGGGCGAGC
TGGGCATCTGCGGGGTCGCCGCGGCAATCGCCAATGCGGTCTACAACGCCACCGGCGTGCGCGTACGCGACTACCCGGTG
ACGCTGGACAAGCTGCTGCCACACCTGCCTGAGCCGCTGCGCGCGTGA

Upstream 100 bases:

>100_bases
ATCCTGCTGGAGGGCGCACAGCCCACCGAACACAACGCATTCAAGGTGCCGCTGGTGGAACGCACCTTGAGCGCCATCCT
GGCGGACACGAGGGCCTGAC

Downstream 100 bases:

>100_bases
ATGCAGTGGCGGCTCCTGTCAGCCACGGTATGCCGGCTGCCACCGCGTGGCCGGCCTGGCCGGAGTACGCCCTGCACGAT
GATCTGTTGCCGACGTTGTC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 735; Mature: 735

Protein sequence:

>735_residues
MKFDTPAGTNPIDQGKIVGKPVDRIDGPLKTTGMAPYAYEHHDLPGKAAYGHVVGAGIAKGTIRSIDLSAARNAPGVLGI
VTAQNAGKLQKGKLNTAKLLGGPEIQHYHQAIAVVVAETFEQARAAGQLIKVDYGRHVGEYDLARARPKAEVTKEGGAPN
STVGDFAGAFAAAPVQLDAEYTTPDHSHAMMEPHASIAMWEGDKLNVWTSNQMINWGAGDLARTLGLPPENVRLMSPYIG
GGFGGKLFLRADAVLAALAARQVKRPVKVMLSRPLIANNTTHRPATVQRIRIGAQRDGKITAIAHESWSGDLPGGAPEIA
ASQTQLLYAGANRLITTRLAVLDLPEGNAMRAPGEAPGLMALEVAMDEMAEKLAMDPVKFRVVNDTQVDPENPQRPFSQR
QLVKCLEDGAKQFGWSKRKAKPGSTRDGRWLVGMGVASAFRNAIATTSGARMRLEQGGRVVVETDMTDIGTGSYTIIAQT
AAEMLGVPLDWVDVRLGDSSFPVSAGSGGQWGANSSTAGVYAAAVKLREAIATQLGLDPSKAEFADGHVRAGGKRIALGD
AAAQGPLVVEDKIEFGDLAKKQQLSTFGAHFVEVGVDVVTAEVRIRRMLAVCAAGRILNPKTARSQVIGAMTMGAGSALM
EELVVDKRLGFFVNHDLAGYEVPVHADIPHQDVVFLEETDPMSSPMKAKGVGELGICGVAAAIANAVYNATGVRVRDYPV
TLDKLLPHLPEPLRA

Sequences:

>Translated_735_residues
MKFDTPAGTNPIDQGKIVGKPVDRIDGPLKTTGMAPYAYEHHDLPGKAAYGHVVGAGIAKGTIRSIDLSAARNAPGVLGI
VTAQNAGKLQKGKLNTAKLLGGPEIQHYHQAIAVVVAETFEQARAAGQLIKVDYGRHVGEYDLARARPKAEVTKEGGAPN
STVGDFAGAFAAAPVQLDAEYTTPDHSHAMMEPHASIAMWEGDKLNVWTSNQMINWGAGDLARTLGLPPENVRLMSPYIG
GGFGGKLFLRADAVLAALAARQVKRPVKVMLSRPLIANNTTHRPATVQRIRIGAQRDGKITAIAHESWSGDLPGGAPEIA
ASQTQLLYAGANRLITTRLAVLDLPEGNAMRAPGEAPGLMALEVAMDEMAEKLAMDPVKFRVVNDTQVDPENPQRPFSQR
QLVKCLEDGAKQFGWSKRKAKPGSTRDGRWLVGMGVASAFRNAIATTSGARMRLEQGGRVVVETDMTDIGTGSYTIIAQT
AAEMLGVPLDWVDVRLGDSSFPVSAGSGGQWGANSSTAGVYAAAVKLREAIATQLGLDPSKAEFADGHVRAGGKRIALGD
AAAQGPLVVEDKIEFGDLAKKQQLSTFGAHFVEVGVDVVTAEVRIRRMLAVCAAGRILNPKTARSQVIGAMTMGAGSALM
EELVVDKRLGFFVNHDLAGYEVPVHADIPHQDVVFLEETDPMSSPMKAKGVGELGICGVAAAIANAVYNATGVRVRDYPV
TLDKLLPHLPEPLRA
>Mature_735_residues
MKFDTPAGTNPIDQGKIVGKPVDRIDGPLKTTGMAPYAYEHHDLPGKAAYGHVVGAGIAKGTIRSIDLSAARNAPGVLGI
VTAQNAGKLQKGKLNTAKLLGGPEIQHYHQAIAVVVAETFEQARAAGQLIKVDYGRHVGEYDLARARPKAEVTKEGGAPN
STVGDFAGAFAAAPVQLDAEYTTPDHSHAMMEPHASIAMWEGDKLNVWTSNQMINWGAGDLARTLGLPPENVRLMSPYIG
GGFGGKLFLRADAVLAALAARQVKRPVKVMLSRPLIANNTTHRPATVQRIRIGAQRDGKITAIAHESWSGDLPGGAPEIA
ASQTQLLYAGANRLITTRLAVLDLPEGNAMRAPGEAPGLMALEVAMDEMAEKLAMDPVKFRVVNDTQVDPENPQRPFSQR
QLVKCLEDGAKQFGWSKRKAKPGSTRDGRWLVGMGVASAFRNAIATTSGARMRLEQGGRVVVETDMTDIGTGSYTIIAQT
AAEMLGVPLDWVDVRLGDSSFPVSAGSGGQWGANSSTAGVYAAAVKLREAIATQLGLDPSKAEFADGHVRAGGKRIALGD
AAAQGPLVVEDKIEFGDLAKKQQLSTFGAHFVEVGVDVVTAEVRIRRMLAVCAAGRILNPKTARSQVIGAMTMGAGSALM
EELVVDKRLGFFVNHDLAGYEVPVHADIPHQDVVFLEETDPMSSPMKAKGVGELGICGVAAAIANAVYNATGVRVRDYPV
TLDKLLPHLPEPLRA

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI71773480, Length=753, Percent_Identity=24.5683930942895, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI91823271, Length=773, Percent_Identity=23.9327296248383, Blast_Score=130, Evalue=3e-30,
Organism=Escherichia coli, GI1786478, Length=731, Percent_Identity=69.3570451436389, Blast_Score=1020, Evalue=0.0,
Organism=Escherichia coli, GI1789230, Length=752, Percent_Identity=30.3191489361702, Blast_Score=249, Evalue=4e-67,
Organism=Escherichia coli, GI1789246, Length=756, Percent_Identity=26.4550264550265, Blast_Score=187, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17540638, Length=725, Percent_Identity=25.1034482758621, Blast_Score=158, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI32566215, Length=557, Percent_Identity=23.5188509874327, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17539860, Length=725, Percent_Identity=21.3793103448276, Blast_Score=86, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24647199, Length=739, Percent_Identity=24.6278755074425, Blast_Score=148, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24647195, Length=739, Percent_Identity=24.3572395128552, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24647201, Length=732, Percent_Identity=24.3169398907104, Blast_Score=137, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24647197, Length=757, Percent_Identity=23.9101717305152, Blast_Score=130, Evalue=3e-30,
Organism=Drosophila melanogaster, GI24647193, Length=733, Percent_Identity=24.1473396998636, Blast_Score=123, Evalue=5e-28,
Organism=Drosophila melanogaster, GI17737937, Length=616, Percent_Identity=24.6753246753247, Blast_Score=115, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 77813; Mature: 77813

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDTPAGTNPIDQGKIVGKPVDRIDGPLKTTGMAPYAYEHHDLPGKAAYGHVVGAGIAK
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
GTIRSIDLSAARNAPGVLGIVTAQNAGKLQKGKLNTAKLLGGPEIQHYHQAIAVVVAETF
CCEEEEEHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
EQARAAGQLIKVDYGRHVGEYDLARARPKAEVTKEGGAPNSTVGDFAGAFAAAPVQLDAE
HHHHHCCCEEEEECCCCCCCHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHCCCEEECCC
YTTPDHSHAMMEPHASIAMWEGDKLNVWTSNQMINWGAGDLARTLGLPPENVRLMSPYIG
CCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEECCCHHHHHHHCCCCCCEEEECCCCC
GGFGGKLFLRADAVLAALAARQVKRPVKVMLSRPLIANNTTHRPATVQRIRIGAQRDGKI
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEECCCCCCCE
TAIAHESWSGDLPGGAPEIAASQTQLLYAGANRLITTRLAVLDLPEGNAMRAPGEAPGLM
EEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCHH
ALEVAMDEMAEKLAMDPVKFRVVNDTQVDPENPQRPFSQRQLVKCLEDGAKQFGWSKRKA
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
KPGSTRDGRWLVGMGVASAFRNAIATTSGARMRLEQGGRVVVETDMTDIGTGSYTIIAQT
CCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEHH
AAEMLGVPLDWVDVRLGDSSFPVSAGSGGQWGANSSTAGVYAAAVKLREAIATQLGLDPS
HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
KAEFADGHVRAGGKRIALGDAAAQGPLVVEDKIEFGDLAKKQQLSTFGAHFVEVGVDVVT
CCCCCCCEEECCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHH
AEVRIRRMLAVCAAGRILNPKTARSQVIGAMTMGAGSALMEELVVDKRLGFFVNHDLAGY
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCE
EVPVHADIPHQDVVFLEETDPMSSPMKAKGVGELGICGVAAAIANAVYNATGVRVRDYPV
EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
TLDKLLPHLPEPLRA
CHHHHHHCCCCHHCC
>Mature Secondary Structure
MKFDTPAGTNPIDQGKIVGKPVDRIDGPLKTTGMAPYAYEHHDLPGKAAYGHVVGAGIAK
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCC
GTIRSIDLSAARNAPGVLGIVTAQNAGKLQKGKLNTAKLLGGPEIQHYHQAIAVVVAETF
CCEEEEEHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHH
EQARAAGQLIKVDYGRHVGEYDLARARPKAEVTKEGGAPNSTVGDFAGAFAAAPVQLDAE
HHHHHCCCEEEEECCCCCCCHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHCCCEEECCC
YTTPDHSHAMMEPHASIAMWEGDKLNVWTSNQMINWGAGDLARTLGLPPENVRLMSPYIG
CCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEECCCHHHHHHHCCCCCCEEEECCCCC
GGFGGKLFLRADAVLAALAARQVKRPVKVMLSRPLIANNTTHRPATVQRIRIGAQRDGKI
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEECCCCCCCE
TAIAHESWSGDLPGGAPEIAASQTQLLYAGANRLITTRLAVLDLPEGNAMRAPGEAPGLM
EEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCHH
ALEVAMDEMAEKLAMDPVKFRVVNDTQVDPENPQRPFSQRQLVKCLEDGAKQFGWSKRKA
HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC
KPGSTRDGRWLVGMGVASAFRNAIATTSGARMRLEQGGRVVVETDMTDIGTGSYTIIAQT
CCCCCCCCCEEEEHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCEEEEEHH
AAEMLGVPLDWVDVRLGDSSFPVSAGSGGQWGANSSTAGVYAAAVKLREAIATQLGLDPS
HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
KAEFADGHVRAGGKRIALGDAAAQGPLVVEDKIEFGDLAKKQQLSTFGAHFVEVGVDVVT
CCCCCCCEEECCCCEEEECCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHH
AEVRIRRMLAVCAAGRILNPKTARSQVIGAMTMGAGSALMEELVVDKRLGFFVNHDLAGY
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEECCCCCCE
EVPVHADIPHQDVVFLEETDPMSSPMKAKGVGELGICGVAAAIANAVYNATGVRVRDYPV
EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCC
TLDKLLPHLPEPLRA
CHHHHHHCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]