Click here to switch to the map view.

The map label for this gene is yogA [H]

Identifier: 66767711

GI number: 66767711

Start: 1672147

End: 1673154

Strand: Direct

Name: yogA [H]

Synonym: XC_1384

Alternate gene names: 66767711

Gene position: 1672147-1673154 (Clockwise)

Preceding gene: 66767709

Following gene: 66767712

Centisome position: 32.48

GC content: 67.36

Gene sequence:

>1008_bases
ATGCGTGGCATTCGTTTGCAGCAACCAGCAGGCCTGGCGTCACTGAGCTCCGTCGCGTTGCCCGATCCCGGCCAGCCCGC
GGCAGGCCAGATCCGCGTGCGGCTGCATGCCAGTTCGCTGAATTTCCATGACCTGGGCATTGTCAGCGGACAGATGCCAA
CCGCCGATGGCCGCATCCCGATGTCCGACGGTGCTGGCGTGGTAGAGGCGGTGGGCGAGGCCGTCAGCGATTTCGCCGTG
GGCGACCACGTGGTGTCTACGTTCTTCCCGCAGTGGCTGGATGGCGAGCCGTTGCATGCCGGCTTTGCCACCACGCCTGG
CGACGGCGTAGACGGCTATGCACGCTCGGCCGTGGTCGCGGCTGCGCAGGCTTTCACGCATGCGCCGCGCGGCTATAGCC
ATGCCGAAGCTGCCACCTTGACCACCGCCGGCGTCACGGCGTGGCGCGCCCTGGTGGTCAATGGCCGGATCAAGGCCGGC
GACACCGTGCTGGTGCTTGGCACCGGCGGCGTGTCGATCTTCGCGCTGCAGTTCGCCAAGGCGATGGGCGCCATGGTGAT
CGTCACCTCGTCGTCGGACCAGAAGCTGGAGACGGCGCGTACGCTCGGTGCCGACCACTGCATCAATTATCGCCAGCACA
CCGAATGGGCGGCGCAGGTGCTGGAGATCACCAACGGGCGCGGTGTGGACCACGTGGTGGAAGTCGGCGGCCCGGGCACG
CTGGCGCAGTCCATCAAGGCTGCGCGCGTGGGCGGGCACATCGCCTTGATCGGTGTGCTCACCGGCGCCGCGGGCCCGGT
GCCCACCGCCGAGATGATGGGACGCCAGCAACGGCTGCAAGGCTTGGTGGTGGGTAGCCGCCGGCATCAGCAGGAGTTGG
TGCGGGCACTGGACGGTTTGCCGTTGCGGCCGGTGATCGATCGTTCGTTTGCGCTGGAGGACATCGCCGAGGCGTTTGCG
TTGCAACACGCCGGTGGTCACCTGGGCAAGATCGTGCTGGAATTCTGA

Upstream 100 bases:

>100_bases
AATTGTTCACGGCGTGGCAAGTGCACACAGCAGACGCGACCGCATGCGCGTAACGGCGCGCGTGGTATCCCGGGCGGCCC
ATCAGTATGAGGAGACCACG

Downstream 100 bases:

>100_bases
GCCTGGCGCGGCGCGCGCGGGCAGGGTCCAACACCTGCCTGCGGCGCGTCATGCGATAGCGCTGCTGATGTGCGGCGTGG
CGGCAGAGGGTGTCAGCGAT

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MRGIRLQQPAGLASLSSVALPDPGQPAAGQIRVRLHASSLNFHDLGIVSGQMPTADGRIPMSDGAGVVEAVGEAVSDFAV
GDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVAAAQAFTHAPRGYSHAEAATLTTAGVTAWRALVVNGRIKAG
DTVLVLGTGGVSIFALQFAKAMGAMVIVTSSSDQKLETARTLGADHCINYRQHTEWAAQVLEITNGRGVDHVVEVGGPGT
LAQSIKAARVGGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQELVRALDGLPLRPVIDRSFALEDIAEAFA
LQHAGGHLGKIVLEF

Sequences:

>Translated_335_residues
MRGIRLQQPAGLASLSSVALPDPGQPAAGQIRVRLHASSLNFHDLGIVSGQMPTADGRIPMSDGAGVVEAVGEAVSDFAV
GDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVAAAQAFTHAPRGYSHAEAATLTTAGVTAWRALVVNGRIKAG
DTVLVLGTGGVSIFALQFAKAMGAMVIVTSSSDQKLETARTLGADHCINYRQHTEWAAQVLEITNGRGVDHVVEVGGPGT
LAQSIKAARVGGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQELVRALDGLPLRPVIDRSFALEDIAEAFA
LQHAGGHLGKIVLEF
>Mature_335_residues
MRGIRLQQPAGLASLSSVALPDPGQPAAGQIRVRLHASSLNFHDLGIVSGQMPTADGRIPMSDGAGVVEAVGEAVSDFAV
GDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVAAAQAFTHAPRGYSHAEAATLTTAGVTAWRALVVNGRIKAG
DTVLVLGTGGVSIFALQFAKAMGAMVIVTSSSDQKLETARTLGADHCINYRQHTEWAAQVLEITNGRGVDHVVEVGGPGT
LAQSIKAARVGGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQELVRALDGLPLRPVIDRSFALEDIAEAFA
LQHAGGHLGKIVLEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=355, Percent_Identity=27.6056338028169, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI22538444, Length=355, Percent_Identity=27.6056338028169, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI194239674, Length=346, Percent_Identity=27.1676300578035, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI13236495, Length=346, Percent_Identity=27.1676300578035, Blast_Score=95, Evalue=8e-20,
Organism=Homo sapiens, GI194239676, Length=346, Percent_Identity=26.5895953757225, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI47519420, Length=351, Percent_Identity=25.3561253561254, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI28557745, Length=248, Percent_Identity=30.241935483871, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI87082125, Length=349, Percent_Identity=27.2206303724928, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI87081918, Length=322, Percent_Identity=27.0186335403727, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1790485, Length=245, Percent_Identity=29.3877551020408, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1786552, Length=250, Percent_Identity=25.6, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI71988145, Length=337, Percent_Identity=25.2225519287834, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324486, Length=354, Percent_Identity=25.4237288135593, Blast_Score=83, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6323961, Length=336, Percent_Identity=25.8928571428571, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6323729, Length=353, Percent_Identity=25.4957507082153, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6319520, Length=305, Percent_Identity=25.5737704918033, Blast_Score=76, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6319621, Length=353, Percent_Identity=25.7790368271955, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319955, Length=291, Percent_Identity=27.8350515463918, Blast_Score=74, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322619, Length=291, Percent_Identity=27.8350515463918, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17737895, Length=350, Percent_Identity=23.7142857142857, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34753; Mature: 34753

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGIRLQQPAGLASLSSVALPDPGQPAAGQIRVRLHASSLNFHDLGIVSGQMPTADGRIP
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCEECCEEECCCCCCCCCCEE
MSDGAGVVEAVGEAVSDFAVGDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AAQAFTHAPRGYSHAEAATLTTAGVTAWRALVVNGRIKAGDTVLVLGTGGVSIFALQFAK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEECCEEECCCEEEEEECCCHHHHHHHHHH
AMGAMVIVTSSSDQKLETARTLGADHCINYRQHTEWAAQVLEITNGRGVDHVVEVGGPGT
HCCEEEEEECCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHH
LAQSIKAARVGGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQELVRALDGL
HHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHCHHHHHHHEEECCHHHHHHHHHHHCCC
PLRPVIDRSFALEDIAEAFALQHAGGHLGKIVLEF
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MRGIRLQQPAGLASLSSVALPDPGQPAAGQIRVRLHASSLNFHDLGIVSGQMPTADGRIP
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEEEECCCCEECCEEECCCCCCCCCCEE
MSDGAGVVEAVGEAVSDFAVGDHVVSTFFPQWLDGEPLHAGFATTPGDGVDGYARSAVVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AAQAFTHAPRGYSHAEAATLTTAGVTAWRALVVNGRIKAGDTVLVLGTGGVSIFALQFAK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEECCEEECCCEEEEEECCCHHHHHHHHHH
AMGAMVIVTSSSDQKLETARTLGADHCINYRQHTEWAAQVLEITNGRGVDHVVEVGGPGT
HCCEEEEEECCCCCHHHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECCCHH
LAQSIKAARVGGHIALIGVLTGAAGPVPTAEMMGRQQRLQGLVVGSRRHQQELVRALDGL
HHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHCHHHHHHHEEECCHHHHHHHHHHHCCC
PLRPVIDRSFALEDIAEAFALQHAGGHLGKIVLEF
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]