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The map label for this gene is yddE [C]

Identifier: 66767697

GI number: 66767697

Start: 1654523

End: 1655404

Strand: Reverse

Name: yddE [C]

Synonym: XC_1370

Alternate gene names: 66767697

Gene position: 1655404-1654523 (Counterclockwise)

Preceding gene: 66767698

Following gene: 66767691

Centisome position: 32.15

GC content: 69.61

Gene sequence:

>882_bases
ATGACCACGCGTCGATTCCTGCAACTGGATGTGTTCTCGGCCCGCCCCGGCAGCGGCAACCCGTTGGCGGTGGTGCTCGA
CGCGGAAGGCCTAGACGATGCCGCGATGCAGGCCATTGCGCGCTGGACCAAGTTGCCGGAAACCACCTTCGTGTTTCCGG
CCCCCGACGCCGCCAGCAGTTATCGCCTGCGCATGTTTTCGCCGCAAAAAGAGGTGCCGTTCGCCGGCCACCCCAGTGTC
GGCACCGCGCATGCAGTGCTCGACGCCGGCCTGGCCACGCCGCGCGACGGCGTGCTGGTGCAGGACGGCATCGCCGGGCA
ATTGCCGCTGCGCGTGGAGCAGATCGCCGGCCACCGCAGCATCGCCATCCGCACGCCGCGTGCGCGCGTCACCGAACAGC
TGCAGTCCGACGACCCACGCCTGAGCGACAGCCTGCGCGGTTGGCCGCTGGGCGCCTTGCCGCCGGCCCTGATGGACGGC
GGACGTACCTGGTGGGTGGTGGAACTGGCCAGCGAGGCCGCCTTGCGCAGCCTGGACCCGGATTGGAACGCGATTGCGGC
ATTGGCCGAATCCACCGGCAGCATGGGCGTGTTCGCCTACGCGCGTGCAGCGGCAACCGGCGCCTACGATCTGGCGGTGC
GCGCCTTCGTCGGCAATGGCCGCCGCTTCGAAGACGCGGCCTCCGGCGCCGCCAACGCCGTGCTTGCGGCCTGGCTGGAT
AGCAAGGATGCCTTGCCCGGCACCGACGGCCGCTACGTGGTCAGCCAGGGCCGCGAAATCGGCTTCGACGCGCTGCTGGA
GCTGCGCATCGATGCCAACGGCGAGGTCTGGTCGGGTGGACAGGTGCAGACGGTGATTCGCGGCACGCTGGATTGGGAGT
GA

Upstream 100 bases:

>100_bases
GACGCCGCCGGCGATGTATGGATCGGTGGCGCAACGCAGCAAGTGATCGAAGGCCGCATCGCTTGGTAAGCTGCCGCGCC
CTGCTCGCGGACCCGCTCCC

Downstream 100 bases:

>100_bases
TTGGACTTCCCTTGCCCATCGCCGGCACGAGAGACGGGATAGCTGACCGTGATCGGTCATTGGAACGTCGGACGTAAGAA
ACACCAGGGCCGGATAGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTTRRFLQLDVFSARPGSGNPLAVVLDAEGLDDAAMQAIARWTKLPETTFVFPAPDAASSYRLRMFSPQKEVPFAGHPSV
GTAHAVLDAGLATPRDGVLVQDGIAGQLPLRVEQIAGHRSIAIRTPRARVTEQLQSDDPRLSDSLRGWPLGALPPALMDG
GRTWWVVELASEAALRSLDPDWNAIAALAESTGSMGVFAYARAAATGAYDLAVRAFVGNGRRFEDAASGAANAVLAAWLD
SKDALPGTDGRYVVSQGREIGFDALLELRIDANGEVWSGGQVQTVIRGTLDWE

Sequences:

>Translated_293_residues
MTTRRFLQLDVFSARPGSGNPLAVVLDAEGLDDAAMQAIARWTKLPETTFVFPAPDAASSYRLRMFSPQKEVPFAGHPSV
GTAHAVLDAGLATPRDGVLVQDGIAGQLPLRVEQIAGHRSIAIRTPRARVTEQLQSDDPRLSDSLRGWPLGALPPALMDG
GRTWWVVELASEAALRSLDPDWNAIAALAESTGSMGVFAYARAAATGAYDLAVRAFVGNGRRFEDAASGAANAVLAAWLD
SKDALPGTDGRYVVSQGREIGFDALLELRIDANGEVWSGGQVQTVIRGTLDWE
>Mature_292_residues
TTRRFLQLDVFSARPGSGNPLAVVLDAEGLDDAAMQAIARWTKLPETTFVFPAPDAASSYRLRMFSPQKEVPFAGHPSVG
TAHAVLDAGLATPRDGVLVQDGIAGQLPLRVEQIAGHRSIAIRTPRARVTEQLQSDDPRLSDSLRGWPLGALPPALMDGG
RTWWVVELASEAALRSLDPDWNAIAALAESTGSMGVFAYARAAATGAYDLAVRAFVGNGRRFEDAASGAANAVLAAWLDS
KDALPGTDGRYVVSQGREIGFDALLELRIDANGEVWSGGQVQTVIRGTLDWE

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=290, Percent_Identity=28.2758620689655, Blast_Score=94, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6321818, Length=297, Percent_Identity=28.956228956229, Blast_Score=122, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 31219; Mature: 31088

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRRFLQLDVFSARPGSGNPLAVVLDAEGLDDAAMQAIARWTKLPETTFVFPAPDAASS
CCCCEEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC
YRLRMFSPQKEVPFAGHPSVGTAHAVLDAGLATPRDGVLVQDGIAGQLPLRVEQIAGHRS
EEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCCE
IAIRTPRARVTEQLQSDDPRLSDSLRGWPLGALPPALMDGGRTWWVVELASEAALRSLDP
EEEECCHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHCCCCEEEEEEECHHHHHHHCCC
DWNAIAALAESTGSMGVFAYARAAATGAYDLAVRAFVGNGRRFEDAASGAANAVLAAWLD
CHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHEEEEECCCCCCCHHHHCCHHHHEEEEECC
SKDALPGTDGRYVVSQGREIGFDALLELRIDANGEVWSGGQVQTVIRGTLDWE
CCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCEECCCEEEEEEEECCCCC
>Mature Secondary Structure 
TTRRFLQLDVFSARPGSGNPLAVVLDAEGLDDAAMQAIARWTKLPETTFVFPAPDAASS
CCCEEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCC
YRLRMFSPQKEVPFAGHPSVGTAHAVLDAGLATPRDGVLVQDGIAGQLPLRVEQIAGHRS
EEEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHCCCCE
IAIRTPRARVTEQLQSDDPRLSDSLRGWPLGALPPALMDGGRTWWVVELASEAALRSLDP
EEEECCHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHCCCCEEEEEEECHHHHHHHCCC
DWNAIAALAESTGSMGVFAYARAAATGAYDLAVRAFVGNGRRFEDAASGAANAVLAAWLD
CHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHEEEEECCCCCCCHHHHCCHHHHEEEEECC
SKDALPGTDGRYVVSQGREIGFDALLELRIDANGEVWSGGQVQTVIRGTLDWE
CCCCCCCCCCCEEECCCCCCCCEEEEEEEECCCCCEECCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]