| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is yhgE [H]
Identifier: 66767691
GI number: 66767691
Start: 1648650
End: 1650506
Strand: Reverse
Name: yhgE [H]
Synonym: XC_1364
Alternate gene names: 66767691
Gene position: 1650506-1648650 (Counterclockwise)
Preceding gene: 66767697
Following gene: 66767690
Centisome position: 32.06
GC content: 66.83
Gene sequence:
>1857_bases ATGCTGCCCACATCTGCGCTGCACCCCGCCTCCGACGATCTGCCCCTGCCCTGCCAGACCCGCGCGTTCATCGTGCTGGT GGCCCTGCTGCAAGGCGGCCTGCTGTATCTGGCCGAATGGGGCGCAGACCACGGCGTGGCGCCGTTCGCTGCGCTGGGTG GGCGCGTGTGCTGGTACACCCTGGTGCTCACCGTTCCCAGCATGCTGCTGTTGAGCGTGCAGACCCTGCACGACCGTCGC CTGTGGCAGCAGTTGGCCGTGGTGGCGGCCGTGTTCGCCGCACTTGCCGGCTGGGCGGCGTGGAGCGCAACCGGGGCACC CGGCCTGGAAAGCAACAAGGTGCTGACCCCGTTCGGCCTGAGCGTGGCGGCCGCGCTGTTGATCGCCCTGCCCTGGCTGC AGTTCCGTCAGCACCATGGCAGCTGGCGTGCCAGCTATCACGCGCTGTTCGAACACGCCTGGCAGAACACGCTCACGCTT GCGTTGGCACTGGTGTTCGTCGGCGTGTGCTGGGGCGTGCTGACGTTATGGGCCGAGTTGTTCGCATTGGTGAAGATCGA TCTCTTCCGCACGCTGTTTCGCGAGGATGCCTTCATCTACCTGGCCACCGGCACGATGGCTGGCCTGGGCATCCTGATCG GGCGCACCCGCCAGCGTGCGGTGCAGGTGATGCGGCAGATCGTGTTCGCCCTGTGCACCGGCCTGGTGCCCTTGCTGGCC AGTATCGCGCTGCTGTTCATCCTCACCCTGCCGCTGACCGGCCTGCAGCCGCTGTGGCAGACCCGTGCGGCGGCGACGAT CCTGCTGTGCATGGTGTTCGGGCTGGTGCTGTTCACCAATGCGGTGTACCAGGATGGCGCGACACCGCCGGCGTATCCGG GCTGGTTGCGGCGCGTTGTCGAGGCCGGGCTGCTCACACTGCCGCTCTATGCAGGCCTGGCGCTTTACGCGGTGGGCGTG CGCATTGCCCAGTACGGCTGGACCGGCGAACGCTTCTGGGGCGTGGTGCTGGCCGCGGTGGCCAGCGCCTATGCAGTGGG ATATGCCATTGCAGTGCTGCGGCCACGCCCGGGGCAGTGGCTGGCGCCGCTGGCGCGCAGCAACAAGATGCTGTCGTGGG TGGTCATCGCCCTGCTGCTATTGGTCAATACGCCTGTGCTGGATCCGTATCGGATTGTGGTGGCCAGCCAGCTGCAGCAG TTGGCACAGCGCGGCGGCACTGCAAACCCGGATCTGCTGCAGGACGATCTGGAATTCCTGCGGTTTGCCAACGGCCGCCG TGGTTATCACGCGGTGCAAGCGCTGCGGGACACCCCCGTCTTTGCCAACGATGCCAAGCGCAGCCGGCAGCTCACTCTGC TGCTAGGGCGGACGCAACGTTGGCAGGAACCGCAGTCGGATGACGCACTGCGACGCTCGCGCATGCACGACGCGGCCGAG CTGCAGGCACACCTGCAGCTCGCCGCAGGCAGCAGCAGCCCGGACCCAAGCTGGTGGAGCACCCTGGCGCAGGGCAGCTT GCACAACGACAGCTGCCTGCAGCGCGATGCCGACTGCGTGATCACCCGCCGCGACCTGGATCAGGACGGCCAGGACGAGG TCATGCTATGCGATCTTTCAGGGAAGTTTGGTATCACCTGCACGCTGCACACCCGCGATGCGCAAGGCTGGTACCGGGTG GACACAGTGAACAGCTTCCCGCAGCGCAGCCAGCAGCAAGAAGCCCTGCGCGAGGCCGTGCGCCAAGGCAAACTCGCCAC GCAGCCACGCCGTTGGCCTGACCTGCTGTTTCCCGGCGGTGAACCGATGCGCATCAACCCATCCGCCAATGCGCGCAAGA CAACGGAGACCCCATGA
Upstream 100 bases:
>100_bases GAGGCGTGGGCAAAACAGACATGCGGCCATTCTAGCGGTTCGTTTCGAACCGCGCTGGGGCGCTGCCATACTGAGCGCTT GCCTCAGCCATGGACTGCCG
Downstream 100 bases:
>100_bases GCGGTTATTGCAGCATCGCGCCAGGCCACCCGGTGCATGGCCACTACCACGACCACGAGTACGGCTTCCCGCAGCGCGAC GAACGCGAGCTGTTCGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MLPTSALHPASDDLPLPCQTRAFIVLVALLQGGLLYLAEWGADHGVAPFAALGGRVCWYTLVLTVPSMLLLSVQTLHDRR LWQQLAVVAAVFAALAGWAAWSATGAPGLESNKVLTPFGLSVAAALLIALPWLQFRQHHGSWRASYHALFEHAWQNTLTL ALALVFVGVCWGVLTLWAELFALVKIDLFRTLFREDAFIYLATGTMAGLGILIGRTRQRAVQVMRQIVFALCTGLVPLLA SIALLFILTLPLTGLQPLWQTRAAATILLCMVFGLVLFTNAVYQDGATPPAYPGWLRRVVEAGLLTLPLYAGLALYAVGV RIAQYGWTGERFWGVVLAAVASAYAVGYAIAVLRPRPGQWLAPLARSNKMLSWVVIALLLLVNTPVLDPYRIVVASQLQQ LAQRGGTANPDLLQDDLEFLRFANGRRGYHAVQALRDTPVFANDAKRSRQLTLLLGRTQRWQEPQSDDALRRSRMHDAAE LQAHLQLAAGSSSPDPSWWSTLAQGSLHNDSCLQRDADCVITRRDLDQDGQDEVMLCDLSGKFGITCTLHTRDAQGWYRV DTVNSFPQRSQQQEALREAVRQGKLATQPRRWPDLLFPGGEPMRINPSANARKTTETP
Sequences:
>Translated_618_residues MLPTSALHPASDDLPLPCQTRAFIVLVALLQGGLLYLAEWGADHGVAPFAALGGRVCWYTLVLTVPSMLLLSVQTLHDRR LWQQLAVVAAVFAALAGWAAWSATGAPGLESNKVLTPFGLSVAAALLIALPWLQFRQHHGSWRASYHALFEHAWQNTLTL ALALVFVGVCWGVLTLWAELFALVKIDLFRTLFREDAFIYLATGTMAGLGILIGRTRQRAVQVMRQIVFALCTGLVPLLA SIALLFILTLPLTGLQPLWQTRAAATILLCMVFGLVLFTNAVYQDGATPPAYPGWLRRVVEAGLLTLPLYAGLALYAVGV RIAQYGWTGERFWGVVLAAVASAYAVGYAIAVLRPRPGQWLAPLARSNKMLSWVVIALLLLVNTPVLDPYRIVVASQLQQ LAQRGGTANPDLLQDDLEFLRFANGRRGYHAVQALRDTPVFANDAKRSRQLTLLLGRTQRWQEPQSDDALRRSRMHDAAE LQAHLQLAAGSSSPDPSWWSTLAQGSLHNDSCLQRDADCVITRRDLDQDGQDEVMLCDLSGKFGITCTLHTRDAQGWYRV DTVNSFPQRSQQQEALREAVRQGKLATQPRRWPDLLFPGGEPMRINPSANARKTTETP >Mature_618_residues MLPTSALHPASDDLPLPCQTRAFIVLVALLQGGLLYLAEWGADHGVAPFAALGGRVCWYTLVLTVPSMLLLSVQTLHDRR LWQQLAVVAAVFAALAGWAAWSATGAPGLESNKVLTPFGLSVAAALLIALPWLQFRQHHGSWRASYHALFEHAWQNTLTL ALALVFVGVCWGVLTLWAELFALVKIDLFRTLFREDAFIYLATGTMAGLGILIGRTRQRAVQVMRQIVFALCTGLVPLLA SIALLFILTLPLTGLQPLWQTRAAATILLCMVFGLVLFTNAVYQDGATPPAYPGWLRRVVEAGLLTLPLYAGLALYAVGV RIAQYGWTGERFWGVVLAAVASAYAVGYAIAVLRPRPGQWLAPLARSNKMLSWVVIALLLLVNTPVLDPYRIVVASQLQQ LAQRGGTANPDLLQDDLEFLRFANGRRGYHAVQALRDTPVFANDAKRSRQLTLLLGRTQRWQEPQSDDALRRSRMHDAAE LQAHLQLAAGSSSPDPSWWSTLAQGSLHNDSCLQRDADCVITRRDLDQDGQDEVMLCDLSGKFGITCTLHTRDAQGWYRV DTVNSFPQRSQQQEALREAVRQGKLATQPRRWPDLLFPGGEPMRINPSANARKTTETP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yrdB [H]
Homologues:
Organism=Escherichia coli, GI1789805, Length=604, Percent_Identity=31.1258278145695, Blast_Score=226, Evalue=4e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68026; Mature: 68026
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTSALHPASDDLPLPCQTRAFIVLVALLQGGLLYLAEWGADHGVAPFAALGGRVCWYT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCHHHHHH LVLTVPSMLLLSVQTLHDRRLWQQLAVVAAVFAALAGWAAWSATGAPGLESNKVLTPFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCH SVAAALLIALPWLQFRQHHGSWRASYHALFEHAWQNTLTLALALVFVGVCWGVLTLWAEL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALVKIDLFRTLFREDAFIYLATGTMAGLGILIGRTRQRAVQVMRQIVFALCTGLVPLLA HHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH SIALLFILTLPLTGLQPLWQTRAAATILLCMVFGLVLFTNAVYQDGATPPAYPGWLRRVV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH EAGLLTLPLYAGLALYAVGVRIAQYGWTGERFWGVVLAAVASAYAVGYAIAVLRPRPGQW HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCH LAPLARSNKMLSWVVIALLLLVNTPVLDPYRIVVASQLQQLAQRGGTANPDLLQDDLEFL HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RFANGRRGYHAVQALRDTPVFANDAKRSRQLTLLLGRTQRWQEPQSDDALRRSRMHDAAE HHHCCCCHHHHHHHHHCCCCCCCCHHHCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHH LQAHLQLAAGSSSPDPSWWSTLAQGSLHNDSCLQRDADCVITRRDLDQDGQDEVMLCDLS HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEECC GKFGITCTLHTRDAQGWYRVDTVNSFPQRSQQQEALREAVRQGKLATQPRRWPDLLFPGG CCCEEEEEEEECCCCCCEEECCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC EPMRINPSANARKTTETP CCEEECCCCCCCCCCCCC >Mature Secondary Structure MLPTSALHPASDDLPLPCQTRAFIVLVALLQGGLLYLAEWGADHGVAPFAALGGRVCWYT CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHCCHHHHHH LVLTVPSMLLLSVQTLHDRRLWQQLAVVAAVFAALAGWAAWSATGAPGLESNKVLTPFGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCH SVAAALLIALPWLQFRQHHGSWRASYHALFEHAWQNTLTLALALVFVGVCWGVLTLWAEL HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FALVKIDLFRTLFREDAFIYLATGTMAGLGILIGRTRQRAVQVMRQIVFALCTGLVPLLA HHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH SIALLFILTLPLTGLQPLWQTRAAATILLCMVFGLVLFTNAVYQDGATPPAYPGWLRRVV HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH EAGLLTLPLYAGLALYAVGVRIAQYGWTGERFWGVVLAAVASAYAVGYAIAVLRPRPGQW HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCH LAPLARSNKMLSWVVIALLLLVNTPVLDPYRIVVASQLQQLAQRGGTANPDLLQDDLEFL HHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH RFANGRRGYHAVQALRDTPVFANDAKRSRQLTLLLGRTQRWQEPQSDDALRRSRMHDAAE HHHCCCCHHHHHHHHHCCCCCCCCHHHCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHH LQAHLQLAAGSSSPDPSWWSTLAQGSLHNDSCLQRDADCVITRRDLDQDGQDEVMLCDLS HHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHCCCCEEEEECCCCCCCCCCEEEEECC GKFGITCTLHTRDAQGWYRVDTVNSFPQRSQQQEALREAVRQGKLATQPRRWPDLLFPGG CCCEEEEEEEECCCCCCEEECCCHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC EPMRINPSANARKTTETP CCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]