| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767689
Identifier: 66767689
GI number: 66767689
Start: 1646843
End: 1648117
Strand: Reverse
Name: 66767689
Synonym: XC_1362
Alternate gene names: NA
Gene position: 1648117-1646843 (Counterclockwise)
Preceding gene: 66767690
Following gene: 66767688
Centisome position: 32.01
GC content: 66.27
Gene sequence:
>1275_bases GTGAGCGACACCTTGCGTGCCGCGTGCGAGGCGCCTGTACTCAGCGCTGCGACCACACCGCATCGCACATTTCGCATGCG GCGCTTGCTGGGCATTGCCGGGCTGCTGATTGCCTTCGCCGCGGCAGTGCCGCAGGCAGACGCGCACAAGGTGCCTAGGC TTTCGCTTTCGCTTTCGCTGGCGCAGGTGCTGGACCAGTTGCGCCGCGACAGCGCCGCCGTGCCGGCCAGCGACCCCATG CCGATCGACACGGTGATGAAGCGCTATGCCGATACCCACGGGCAAAGCTTCGACATCGCAAGCCCGGATCCGGAGGAAGA CCCATCCGAGGCTGTGCCGCCCACGCAGCCGGCCGACGTCACCGATGCCGAGTGGCACGCGCTGCAGGCCTACGGCGCGC ACACCACCAGCGAAGCAGACGATATCTCCGAGAACCGCAGCCACCACTACACCCTGATCGACCTGGACGAGGACGGCCAA CGCGACCTGCTGGATGAGGCCTATGTCGGCGGCACTGGTTTGTTTACGCAGATCACGGTGCTGCAAGGCCATACCGATGG CTTCCGCGCCCCCACCGCCACGCCCACAGGTACGCCAGCGGATAGAGAAGCGGACGCTGGATTCAGCATCAACGGCCGCG GCGGCGACCAGGCGCTGTACTGGCTACGCATCGACGGACGCAGCTACGCGGCCTACCGCGACGGCGACTATTTCCAGGAC ACGCTGACTCTCTCGCGCCCGTTGTCGCCGCTGCCCGCCGAACGCCACCCAACCAAGGCACTGCAGATCCGCTATCGCTA CCAGCACACGCTGGCGCCGCCGCGAAAAGATGCTGCCGAGCGCTTGCTAGAGGAACAGCAGGCGGACGACTGGCTGGCGC AACACCCGGCGATGCGTGCCGCGGTAGACACCCAGTTGCAGCACCTGCGCCTGGATGCACAAGGCCGGCAGCGTTCGCCT GATCCGGAGGCACGCTGCCCGAGTCCCGCCGAAAGCAGCGACCCCGAGCTGGAGGCGCAATGGCCATGGCATGACGCCGG GCATTACACGTTCGACTTTGTCGCCAATCTTCGCGTGCGCCACGGCAGCGAGTGCTACAGCGCCAGCGTGGTGGCGTTCC GCAGCAGCTTTCAAAGCGCCAATACCGCGTGCTGCGTGCTGTGGCTCTACGAGGCGCCCGGCAACCAGGTTGCGAACCTG CCGCTACTGTCAAAGCGCACGCGCAGCGGCATTGCATTGATCACGGCAGCGCCTGTGGATGCCTCGCAAGACTGA
Upstream 100 bases:
>100_bases AATTCCTGATGAGCCTGGGCTACCTGCGCGGCGCGCACCATGCCGACTGCCCGGTATTTGCGGACATTCAGGCACTGTCG CCGCCGTGGATGCATAGCGC
Downstream 100 bases:
>100_bases CCGCACGTAGCGAGCCGCCAGCCAGACAGTGATGGCACCACAGTCGGGTGCTGGGTGCGCGCTCCATGCCCACTCCACGC ACCGGCTGCGCCCACCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSDTLRAACEAPVLSAATTPHRTFRMRRLLGIAGLLIAFAAAVPQADAHKVPRLSLSLSLAQVLDQLRRDSAAVPASDPM PIDTVMKRYADTHGQSFDIASPDPEEDPSEAVPPTQPADVTDAEWHALQAYGAHTTSEADDISENRSHHYTLIDLDEDGQ RDLLDEAYVGGTGLFTQITVLQGHTDGFRAPTATPTGTPADREADAGFSINGRGGDQALYWLRIDGRSYAAYRDGDYFQD TLTLSRPLSPLPAERHPTKALQIRYRYQHTLAPPRKDAAERLLEEQQADDWLAQHPAMRAAVDTQLQHLRLDAQGRQRSP DPEARCPSPAESSDPELEAQWPWHDAGHYTFDFVANLRVRHGSECYSASVVAFRSSFQSANTACCVLWLYEAPGNQVANL PLLSKRTRSGIALITAAPVDASQD
Sequences:
>Translated_424_residues MSDTLRAACEAPVLSAATTPHRTFRMRRLLGIAGLLIAFAAAVPQADAHKVPRLSLSLSLAQVLDQLRRDSAAVPASDPM PIDTVMKRYADTHGQSFDIASPDPEEDPSEAVPPTQPADVTDAEWHALQAYGAHTTSEADDISENRSHHYTLIDLDEDGQ RDLLDEAYVGGTGLFTQITVLQGHTDGFRAPTATPTGTPADREADAGFSINGRGGDQALYWLRIDGRSYAAYRDGDYFQD TLTLSRPLSPLPAERHPTKALQIRYRYQHTLAPPRKDAAERLLEEQQADDWLAQHPAMRAAVDTQLQHLRLDAQGRQRSP DPEARCPSPAESSDPELEAQWPWHDAGHYTFDFVANLRVRHGSECYSASVVAFRSSFQSANTACCVLWLYEAPGNQVANL PLLSKRTRSGIALITAAPVDASQD >Mature_423_residues SDTLRAACEAPVLSAATTPHRTFRMRRLLGIAGLLIAFAAAVPQADAHKVPRLSLSLSLAQVLDQLRRDSAAVPASDPMP IDTVMKRYADTHGQSFDIASPDPEEDPSEAVPPTQPADVTDAEWHALQAYGAHTTSEADDISENRSHHYTLIDLDEDGQR DLLDEAYVGGTGLFTQITVLQGHTDGFRAPTATPTGTPADREADAGFSINGRGGDQALYWLRIDGRSYAAYRDGDYFQDT LTLSRPLSPLPAERHPTKALQIRYRYQHTLAPPRKDAAERLLEEQQADDWLAQHPAMRAAVDTQLQHLRLDAQGRQRSPD PEARCPSPAESSDPELEAQWPWHDAGHYTFDFVANLRVRHGSECYSASVVAFRSSFQSANTACCVLWLYEAPGNQVANLP LLSKRTRSGIALITAAPVDASQD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46468; Mature: 46337
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTLRAACEAPVLSAATTPHRTFRMRRLLGIAGLLIAFAAAVPQADAHKVPRLSLSLSL CCCHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AQVLDQLRRDSAAVPASDPMPIDTVMKRYADTHGQSFDIASPDPEEDPSEAVPPTQPADV HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCC TDAEWHALQAYGAHTTSEADDISENRSHHYTLIDLDEDGQRDLLDEAYVGGTGLFTQITV CCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEE LQGHTDGFRAPTATPTGTPADREADAGFSINGRGGDQALYWLRIDGRSYAAYRDGDYFQD EECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCEEEEECCCCHHHH TLTLSRPLSPLPAERHPTKALQIRYRYQHTLAPPRKDAAERLLEEQQADDWLAQHPAMRA HHHHCCCCCCCCCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH AVDTQLQHLRLDAQGRQRSPDPEARCPSPAESSDPELEAQWPWHDAGHYTFDFVANLRVR HHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEHHHH HGSECYSASVVAFRSSFQSANTACCVLWLYEAPGNQVANLPLLSKRTRSGIALITAAPVD CCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEECCCCHHHHCCCCEEEEEECCCC ASQD CCCC >Mature Secondary Structure SDTLRAACEAPVLSAATTPHRTFRMRRLLGIAGLLIAFAAAVPQADAHKVPRLSLSLSL CCHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH AQVLDQLRRDSAAVPASDPMPIDTVMKRYADTHGQSFDIASPDPEEDPSEAVPPTQPADV HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCC TDAEWHALQAYGAHTTSEADDISENRSHHYTLIDLDEDGQRDLLDEAYVGGTGLFTQITV CCCHHHHHHHHCCCCCCCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEE LQGHTDGFRAPTATPTGTPADREADAGFSINGRGGDQALYWLRIDGRSYAAYRDGDYFQD EECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCEEEEECCCCHHHH TLTLSRPLSPLPAERHPTKALQIRYRYQHTLAPPRKDAAERLLEEQQADDWLAQHPAMRA HHHHCCCCCCCCCCCCCCCEEEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHH AVDTQLQHLRLDAQGRQRSPDPEARCPSPAESSDPELEAQWPWHDAGHYTFDFVANLRVR HHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEHHHH HGSECYSASVVAFRSSFQSANTACCVLWLYEAPGNQVANLPLLSKRTRSGIALITAAPVD CCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEECCCCHHHHCCCCEEEEEECCCC ASQD CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA