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The map label for this gene is bedB [H]

Identifier: 66767669

GI number: 66767669

Start: 1629238

End: 1629567

Strand: Reverse

Name: bedB [H]

Synonym: XC_1342

Alternate gene names: 66767669

Gene position: 1629567-1629238 (Counterclockwise)

Preceding gene: 66767670

Following gene: 66767668

Centisome position: 31.65

GC content: 64.85

Gene sequence:

>330_bases
GTGAGCGACAACTGGACCTTTGTCTGCGCCAGCGGCGAATTGCTGCCGGGCGAGCTGAAGACCGTGTGGGATGAAGTGAC
CGATGCGCCGATCGTGGTGTTCAACCTCGACGGCGCGCTGTACGCGCTGGAAGACCGCTGCAGCCACGAAGATTACGAAC
TCTCGCCCGGCACCTTCGACGCGTCCGCCGGCACCATCGAGTGCCTGCTGCACAGCGCGCGCTTCGATATCCGCGATGGG
CGTCCTCTGTGCGCCCCGGCCTATTCCGCAGTGTCCAAGTTCCCGGTGAAGCAGGAACACGGCGGTATCTGGACCCGCGA
CGACCGCTGA

Upstream 100 bases:

>100_bases
TGTCCAAGCCTTTCCCCTATGGCGACGAGCGCTTCGGCGTGCCGTTGCGCCAGGACCTGCGCTTCGAAGTGCTGGAGAAG
CCGCTCGGCGAGGCCGCGTT

Downstream 100 bases:

>100_bases
GCGCAGTGCCCAGCCGCCACTGGCAGCGCACCGCAAGGCCTCAATCTTTCAGCCGTATGCCATCCATCGGCAAAGATTGC
AAAGAAGAATGATTTGCATT

Product: benzene 1,2-dioxygenase, ferredoxin protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSDNWTFVCASGELLPGELKTVWDEVTDAPIVVFNLDGALYALEDRCSHEDYELSPGTFDASAGTIECLLHSARFDIRDG
RPLCAPAYSAVSKFPVKQEHGGIWTRDDR

Sequences:

>Translated_109_residues
MSDNWTFVCASGELLPGELKTVWDEVTDAPIVVFNLDGALYALEDRCSHEDYELSPGTFDASAGTIECLLHSARFDIRDG
RPLCAPAYSAVSKFPVKQEHGGIWTRDDR
>Mature_108_residues
SDNWTFVCASGELLPGELKTVWDEVTDAPIVVFNLDGALYALEDRCSHEDYELSPGTFDASAGTIECLLHSARFDIRDGR
PLCAPAYSAVSKFPVKQEHGGIWTRDDR

Specific function: This protein seems to be a 2Fe-2S ferredoxin [H]

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788890, Length=101, Percent_Identity=35.6435643564356, Blast_Score=67, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: NA

Molecular weight: Translated: 12065; Mature: 11934

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNWTFVCASGELLPGELKTVWDEVTDAPIVVFNLDGALYALEDRCSHEDYELSPGTFD
CCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCC
ASAGTIECLLHSARFDIRDGRPLCAPAYSAVSKFPVKQEHGGIWTRDDR
CCCCHHEEEHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCC
>Mature Secondary Structure 
SDNWTFVCASGELLPGELKTVWDEVTDAPIVVFNLDGALYALEDRCSHEDYELSPGTFD
CCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCC
ASAGTIECLLHSARFDIRDGRPLCAPAYSAVSKFPVKQEHGGIWTRDDR
CCCCHHEEEHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8344526 [H]