Click here to switch to the map view.

The map label for this gene is kdsC [H]

Identifier: 66767642

GI number: 66767642

Start: 1603928

End: 1604476

Strand: Reverse

Name: kdsC [H]

Synonym: XC_1315

Alternate gene names: 66767642

Gene position: 1604476-1603928 (Counterclockwise)

Preceding gene: 66767643

Following gene: 66767641

Centisome position: 31.16

GC content: 67.58

Gene sequence:

>549_bases
ATGCCCTATTCCCCCCTGCAAGACCTTCCTGCCGACCTCATCGACCGTGCCGCCCGCGTGCGCCTGGCGTGTTTCGACGT
CGACGGCACCCTGACCGACGGCCGCCTGTACTACGACCACGCCGGCAACGAGAGCAAGGCCTTCAATGTGCTCGACGGCC
AGGGCCTGAAGCAGCTGGAGCATGCCGGCATCCACGTGGCGCTGATCACTGCACGCGCCAGCTTGTCGGCGGAAAAACGT
GGCCAGGATCTGGGCCTGCATGTGCAGATCGGGGTCAAGAACAAGCGCCTGGCAGTGCTGGCGCTATGCCAGGAGCACGG
GCTCTCGCTGGACCAGGTGTTGTTCATGGGCGATGACCTGCCCGACCTGCCGGCGTTGCTGGCGGTCGGCTTGCCGGTCG
CGCCCGCCAACGCGCACCCGTGGATTGCCGAACGCGTGCAGTGGCACACCCGCGCACGTGGCGGCGAAGGCGCCGCGCGC
GAAGTCTGCGACGTGGTGCTGGCCGCTCAGGGCCAGGTCGACAGCATCATCGCGAGGTTCTCGGCATGA

Upstream 100 bases:

>100_bases
CGCGGTCGGCGCATTGAACATTCACGACCTGTTGCGCGCCAAGGTGGTTTAACAGGTTCAGTTTTCAACCGCCGGACCCC
GTTCTCACCGATTCGTGCCG

Downstream 100 bases:

>100_bases
CCTGGAACTGGCGCACCACGCTCGGCGCGGTGCTGCTGGCGGCGGCGATCATCAGCGGCTGGTCAGCCTGGCAGCAGCGC
GCGCGTCCGGTTGCCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MPYSPLQDLPADLIDRAARVRLACFDVDGTLTDGRLYYDHAGNESKAFNVLDGQGLKQLEHAGIHVALITARASLSAEKR
GQDLGLHVQIGVKNKRLAVLALCQEHGLSLDQVLFMGDDLPDLPALLAVGLPVAPANAHPWIAERVQWHTRARGGEGAAR
EVCDVVLAAQGQVDSIIARFSA

Sequences:

>Translated_182_residues
MPYSPLQDLPADLIDRAARVRLACFDVDGTLTDGRLYYDHAGNESKAFNVLDGQGLKQLEHAGIHVALITARASLSAEKR
GQDLGLHVQIGVKNKRLAVLALCQEHGLSLDQVLFMGDDLPDLPALLAVGLPVAPANAHPWIAERVQWHTRARGGEGAAR
EVCDVVLAAQGQVDSIIARFSA
>Mature_181_residues
PYSPLQDLPADLIDRAARVRLACFDVDGTLTDGRLYYDHAGNESKAFNVLDGQGLKQLEHAGIHVALITARASLSAEKRG
QDLGLHVQIGVKNKRLAVLALCQEHGLSLDQVLFMGDDLPDLPALLAVGLPVAPANAHPWIAERVQWHTRARGGEGAARE
VCDVVLAAQGQVDSIIARFSA

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=161, Percent_Identity=27.9503105590062, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI2367202, Length=173, Percent_Identity=43.3526011560694, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 19544; Mature: 19412

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSPLQDLPADLIDRAARVRLACFDVDGTLTDGRLYYDHAGNESKAFNVLDGQGLKQLE
CCCCCHHCCCHHHHHHHHHEEEEEEECCCEEECCEEEEECCCCCCCEEEECCCCCHHHHH
HAGIHVALITARASLSAEKRGQDLGLHVQIGVKNKRLAVLALCQEHGLSLDQVLFMGDDL
HCCEEEEEEEECHHHCHHHCCCCCCEEEEEECCCCCCCEEEEHHHHCCCHHHEEEECCCC
PDLPALLAVGLPVAPANAHPWIAERVQWHTRARGGEGAAREVCDVVLAAQGQVDSIIARF
CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
SA
CC
>Mature Secondary Structure 
PYSPLQDLPADLIDRAARVRLACFDVDGTLTDGRLYYDHAGNESKAFNVLDGQGLKQLE
CCCCHHCCCHHHHHHHHHEEEEEEECCCEEECCEEEEECCCCCCCEEEECCCCCHHHHH
HAGIHVALITARASLSAEKRGQDLGLHVQIGVKNKRLAVLALCQEHGLSLDQVLFMGDDL
HCCEEEEEEEECHHHCHHHCCCCCCEEEEEECCCCCCCEEEEHHHHCCCHHHEEEECCCC
PDLPALLAVGLPVAPANAHPWIAERVQWHTRARGGEGAAREVCDVVLAAQGQVDSIIARF
CCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHH
SA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]