| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767615
Identifier: 66767615
GI number: 66767615
Start: 1577039
End: 1577611
Strand: Reverse
Name: 66767615
Synonym: XC_1288
Alternate gene names: NA
Gene position: 1577611-1577039 (Counterclockwise)
Preceding gene: 77761146
Following gene: 66767610
Centisome position: 30.64
GC content: 64.57
Gene sequence:
>573_bases ATGCCACGAGCACGTAGACGAGGCTGCCGCGCACGGGCGGCACCATCGCGGCGCGCTAACGTGGTCTTGTGTTTCGGCAT GGCCTGCCACGTGCGTGCAACGGCCTGCACACTCCACGTGTGTGTGCCGATCATGCACACTGTTGGCCCCGCTCAGCCAA GGACGCGTATGCGCCACTCTTCCCCTTTCTCTGCCGTTGCCACGCTGGTGCTGGTCTTGGGCGCAACCGCTGCGCCGGCC ATGGCCGCAGCCAAGCCCGCCAACAGCGAGGACGTCAAGGCCTATGCCCTGCAGCTGTGCCTGGATGCCAATTACCAACG CGCAGGCAAATATGCCGAAGACCAGTTGCGCGACCGCTCGTTCCTGACCACCACTTACGCGCTCGACAACGCACGGGCCG GGGCCACTGCGCGCTTGCACGAGTTCGTCGCAAAACAGACGGCCGACTTCCACCGCGCCGAGGTGCCAATGAAGGACGAG CAGCGGCTGGGGCCGTACAACCGGATCTTTGCGCAGTGCATGGCCTTCTATCGGTCAGCGCCACTGAGCGAGTTTGTGCA ACGCCTGCGTTGA
Upstream 100 bases:
>100_bases GTTTTGATCAGCCATTGGTGTACTCCTCAACTGTGTGGAACACGGCAGAAATACCGTAGGCGTAGTGTTGATCCGGGCCG ATTAAACCCACGTCCAGCCG
Downstream 100 bases:
>100_bases GCATCCCGAGTAGACGCGACTGCGACCTTGCTGTGCAGGCGCGCGTTCCGTTGCAGTCGCTTGATCAGCTGCGTGCGGCG GGCGTCGTGCCGGCACGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPRARRRGCRARAAPSRRANVVLCFGMACHVRATACTLHVCVPIMHTVGPAQPRTRMRHSSPFSAVATLVLVLGATAAPA MAAAKPANSEDVKAYALQLCLDANYQRAGKYAEDQLRDRSFLTTTYALDNARAGATARLHEFVAKQTADFHRAEVPMKDE QRLGPYNRIFAQCMAFYRSAPLSEFVQRLR
Sequences:
>Translated_190_residues MPRARRRGCRARAAPSRRANVVLCFGMACHVRATACTLHVCVPIMHTVGPAQPRTRMRHSSPFSAVATLVLVLGATAAPA MAAAKPANSEDVKAYALQLCLDANYQRAGKYAEDQLRDRSFLTTTYALDNARAGATARLHEFVAKQTADFHRAEVPMKDE QRLGPYNRIFAQCMAFYRSAPLSEFVQRLR >Mature_189_residues PRARRRGCRARAAPSRRANVVLCFGMACHVRATACTLHVCVPIMHTVGPAQPRTRMRHSSPFSAVATLVLVLGATAAPAM AAAKPANSEDVKAYALQLCLDANYQRAGKYAEDQLRDRSFLTTTYALDNARAGATARLHEFVAKQTADFHRAEVPMKDEQ RLGPYNRIFAQCMAFYRSAPLSEFVQRLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21024; Mature: 20892
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRARRRGCRARAAPSRRANVVLCFGMACHVRATACTLHVCVPIMHTVGPAQPRTRMRHS CCCCHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC SPFSAVATLVLVLGATAAPAMAAAKPANSEDVKAYALQLCLDANYQRAGKYAEDQLRDRS CCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCH FLTTTYALDNARAGATARLHEFVAKQTADFHRAEVPMKDEQRLGPYNRIFAQCMAFYRSA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHCC PLSEFVQRLR CHHHHHHHHC >Mature Secondary Structure PRARRRGCRARAAPSRRANVVLCFGMACHVRATACTLHVCVPIMHTVGPAQPRTRMRHS CCCHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC SPFSAVATLVLVLGATAAPAMAAAKPANSEDVKAYALQLCLDANYQRAGKYAEDQLRDRS CCHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHHHHCCH FLTTTYALDNARAGATARLHEFVAKQTADFHRAEVPMKDEQRLGPYNRIFAQCMAFYRSA HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHCC PLSEFVQRLR CHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA