| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66767530
Identifier: 66767530
GI number: 66767530
Start: 1460028
End: 1460774
Strand: Reverse
Name: 66767530
Synonym: XC_1203
Alternate gene names: NA
Gene position: 1460774-1460028 (Counterclockwise)
Preceding gene: 66767531
Following gene: 66767529
Centisome position: 28.37
GC content: 62.12
Gene sequence:
>747_bases GTGACACCAGGTCAGACCGACACCGAGATGGTGGTGAGCTACGGCGAGCGCCGCATCCACTGCCAGATCCGGCGATCCGC GCTAAGGCGCACCCAACGCGTGGCCATCCATGTGGAACCCGATGGCTGCGTACGGCTGGATGCGCCGCTGCAGGCGACCG ATACTCAGATCAGACGCGCGCTGACCCGGCGCGCACGCTGGATCCACCTGCACTTGGTGGAGATCGAACAACGCCTGCGG CATGTCACCCCACGCGAATACGTCAGTGGCGAAACTGTGCTGTATCTGGGGCGCCGCTACCGGCTAAAGGTAATCCTTGA CGACCAGATGCATGACGTCCGCCTGCGTTGCGGTTACGTCGAAGCACGGGTGCCCAGCCGTGCGCCCGAGGTGGTGCGCG CAGCGCTGGAAGACTGGCAACGCGAGCGCGCCAGGTTGCTAATACCGCAGCGCGTGGCCAACATGGCCGCCCAACTCCGC TGGATCAAACAGATGCCCCCTCTCTCACTGCGGATGATGCAGCGCCAGTGGGGAAGTTGTTCACCCTCGGGAAGGATCAG CTTGAATCTCGGTCTTATCCGTGTCCCGGGCGCCTGTATCGATTACGTCATCCTGCATGAGCTGTGTCATCTGAAAATCC ACAACCACGGCAAGGCCTTCTATCGCCTGCTCGATGCCCATATGCCTGGTTGGCGGGAGATCAAACAACGCCTGGATAGT CTGGCCGAGCTGGCGTTGCGTCACTGA
Upstream 100 bases:
>100_bases AGACCTTGCTTCCGCCCATCTTCGATCTGGTCGGGCTGGACCATGCCAAGGCCATCGTGGAGCAGGTCGTGCACATCACG CGCATTGGGCTCAGCCGCAC
Downstream 100 bases:
>100_bases GCAATTAGATCAGTCGGGCTTCTCCGACCGCCTGGGGCAAGCGTTCGGGTGGTCGGCGTAGTGGAGGCTTACTGCTTACT GCTTACTGCTTACTGCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc-Dependent Protease; Phosphonate Metabolism Protein PhnI; Metal-Dependent Hydrolase Family Protein; Metal Dependent Hydrolases; Zinc Metallopeptidase; Zinc Protease; Peptidase; Protease
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MTPGQTDTEMVVSYGERRIHCQIRRSALRRTQRVAIHVEPDGCVRLDAPLQATDTQIRRALTRRARWIHLHLVEIEQRLR HVTPREYVSGETVLYLGRRYRLKVILDDQMHDVRLRCGYVEARVPSRAPEVVRAALEDWQRERARLLIPQRVANMAAQLR WIKQMPPLSLRMMQRQWGSCSPSGRISLNLGLIRVPGACIDYVILHELCHLKIHNHGKAFYRLLDAHMPGWREIKQRLDS LAELALRH
Sequences:
>Translated_248_residues MTPGQTDTEMVVSYGERRIHCQIRRSALRRTQRVAIHVEPDGCVRLDAPLQATDTQIRRALTRRARWIHLHLVEIEQRLR HVTPREYVSGETVLYLGRRYRLKVILDDQMHDVRLRCGYVEARVPSRAPEVVRAALEDWQRERARLLIPQRVANMAAQLR WIKQMPPLSLRMMQRQWGSCSPSGRISLNLGLIRVPGACIDYVILHELCHLKIHNHGKAFYRLLDAHMPGWREIKQRLDS LAELALRH >Mature_247_residues TPGQTDTEMVVSYGERRIHCQIRRSALRRTQRVAIHVEPDGCVRLDAPLQATDTQIRRALTRRARWIHLHLVEIEQRLRH VTPREYVSGETVLYLGRRYRLKVILDDQMHDVRLRCGYVEARVPSRAPEVVRAALEDWQRERARLLIPQRVANMAAQLRW IKQMPPLSLRMMQRQWGSCSPSGRISLNLGLIRVPGACIDYVILHELCHLKIHNHGKAFYRLLDAHMPGWREIKQRLDSL AELALRH
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29040; Mature: 28909
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPGQTDTEMVVSYGERRIHCQIRRSALRRTQRVAIHVEPDGCVRLDAPLQATDTQIRRA CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCCCCHHHHHHHHH LTRRARWIHLHLVEIEQRLRHVTPREYVSGETVLYLGRRYRLKVILDDQMHDVRLRCGYV HHHHHHEEEEHHHHHHHHHHCCCCHHHCCCCEEEEECCEEEEEEEECCCCHHHHHEECEE EARVPSRAPEVVRAALEDWQRERARLLIPQRVANMAAQLRWIKQMPPLSLRMMQRQWGSC ECCCCCCCHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC SPSGRISLNLGLIRVPGACIDYVILHELCHLKIHNHGKAFYRLLDAHMPGWREIKQRLDS CCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH LAELALRH HHHHHHCC >Mature Secondary Structure TPGQTDTEMVVSYGERRIHCQIRRSALRRTQRVAIHVEPDGCVRLDAPLQATDTQIRRA CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHEEEEEECCCCCEEECCCCCHHHHHHHHH LTRRARWIHLHLVEIEQRLRHVTPREYVSGETVLYLGRRYRLKVILDDQMHDVRLRCGYV HHHHHHEEEEHHHHHHHHHHCCCCHHHCCCCEEEEECCEEEEEEEECCCCHHHHHEECEE EARVPSRAPEVVRAALEDWQRERARLLIPQRVANMAAQLRWIKQMPPLSLRMMQRQWGSC ECCCCCCCHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC SPSGRISLNLGLIRVPGACIDYVILHELCHLKIHNHGKAFYRLLDAHMPGWREIKQRLDS CCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHH LAELALRH HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA