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The map label for this gene is pqqD

Identifier: 66767498

GI number: 66767498

Start: 1416137

End: 1416415

Strand: Reverse

Name: pqqD

Synonym: XC_1170

Alternate gene names: 66767498

Gene position: 1416415-1416137 (Counterclockwise)

Preceding gene: 66767499

Following gene: 66767497

Centisome position: 27.51

GC content: 66.31

Gene sequence:

>279_bases
GTGAGCACCATCAGCCGCGACAGCTGCCCTGCGCTGCGTGCCGGCGTACGCCTGCAGCACGACCGCGCGCGCGACCAGTG
GGTATTGCTGGCGCCCGAACGCGTGGTGGAGCTGGATGACATCGCACTGGTGGTGGCCCAGCGTTACGACGGGACGCAGT
CGCTGGCGCAGATCGCGCAGACGCTGGCCGCCGAATTCGATGCCGATGCGAGCGAGATCGAGACCGACGTGATCGAACTC
ACCACCACCTTGCACCAGAAGCGCTTGCTGCGGTTATGA

Upstream 100 bases:

>100_bases
TGTGGGCACAACTCGACGCATTGCACGTGGCCTACGTCAGCCCCGGCGTTGTCTGGCCGGATGCGTTCGTGCCGGAGCGC
GACAGCAAGCGGGCCGCCGC

Downstream 100 bases:

>100_bases
GCACTGTGCCGCCACCGCTTTCGGTACTGCTGGAGCTGACGCATCGCTGCCCGCTCGCCTGCCCGTATTGCTCCAACCCC
ATCGCGCTGGCGGCATTACG

Product: PqqC/D protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D

Number of amino acids: Translated: 92; Mature: 91

Protein sequence:

>92_residues
MSTISRDSCPALRAGVRLQHDRARDQWVLLAPERVVELDDIALVVAQRYDGTQSLAQIAQTLAAEFDADASEIETDVIEL
TTTLHQKRLLRL

Sequences:

>Translated_92_residues
MSTISRDSCPALRAGVRLQHDRARDQWVLLAPERVVELDDIALVVAQRYDGTQSLAQIAQTLAAEFDADASEIETDVIEL
TTTLHQKRLLRL
>Mature_91_residues
STISRDSCPALRAGVRLQHDRARDQWVLLAPERVVELDDIALVVAQRYDGTQSLAQIAQTLAAEFDADASEIETDVIELT
TTLHQKRLLRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PQQD_XANC8 (Q4UXI3)

Other databases:

- EMBL:   CP000050
- RefSeq:   YP_242260.1
- STRING:   Q4UXI3
- GeneID:   3382179
- GenomeReviews:   CP000050_GR
- KEGG:   xcb:XC_1170
- eggNOG:   NOG42791
- HOGENOM:   HBG544526
- OMA:   WVILAPE
- ProtClustDB:   CLSK451644
- BioCyc:   XCAM314565:XC_1170-MONOMER
- HAMAP:   MF_00655
- InterPro:   IPR008792
- InterPro:   IPR022479
- TIGRFAMs:   TIGR03859

Pfam domain/function: PF05402 PqqD

EC number: NA

Molecular weight: Translated: 10300; Mature: 10169

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTISRDSCPALRAGVRLQHDRARDQWVLLAPERVVELDDIALVVAQRYDGTQSLAQIAQ
CCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TLAAEFDADASEIETDVIELTTTLHQKRLLRL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STISRDSCPALRAGVRLQHDRARDQWVLLAPERVVELDDIALVVAQRYDGTQSLAQIAQ
CCCCCCCCHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TLAAEFDADASEIETDVIELTTTLHQKRLLRL
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA