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The map label for this gene is pqqE

Identifier: 66767497

GI number: 66767497

Start: 1415010

End: 1416140

Strand: Reverse

Name: pqqE

Synonym: XC_1169

Alternate gene names: 66767497

Gene position: 1416140-1415010 (Counterclockwise)

Preceding gene: 66767498

Following gene: 66767496

Centisome position: 27.5

GC content: 69.76

Gene sequence:

>1131_bases
ATGAGCACTGTGCCGCCACCGCTTTCGGTACTGCTGGAGCTGACGCATCGCTGCCCGCTCGCCTGCCCGTATTGCTCCAA
CCCCATCGCGCTGGCGGCATTACGCGAGGAAATGGACACCGCCGGCTGGCGCTCGCTGCTGGAACAGGCCGCCGAGATGG
GCGTGCTGCAGGCGCACTTTTCCGGCGGCGAGCCGATGCTGCGCAAGGACCTGCCCGAACTGGTGGCGCATGCACGCGCG
CTGGGCCTGTACAGCAACCTGATCACCTCCGGCGTGGCCGGCGGCGAGCCGATGCTCGACCAATTGCAGGCCGCCGGCCT
GGAACATGTGCAGCTCAGCGTGCAGGACGTGGACCCGGCCGGCGCCGACCACATTGCCGGCTACCGCAACAGCCTGTCCA
AGAAACGTGCCTTCGCCGCCGCCGTGCGTGCGCGCGGCCTGCCGCTGACGCTCAACGCGGTGATCCACCGGCACAACGCC
GAGCGCGTGCCCGGCATGATCGCGCTGGCGCTGGAATGGGGTGCAGAGCGCATTGAAGTGGCGCATACGCAGTACTACGG
CTGGGGCCTGCGCAACCGTGCCGCCTTGATGCCGAGCCGCGAGCAGCTGGCCGCGACCATCGTGGCGGTGGAGACCGCGC
GGCGCAGCCTTGGCGACCAGCTGGCCATCGACTTCGTCACCCCCGATTACTACGCGCGCCAGCCCAAGCCCTGCATGGGC
GGCTGGGCGCAGCGCTTCGTCAATATCTCTCCGCGTGGCGACGTGCTGCCGTGCCATGCGGCCGAAACCATCGACGGCCT
GCAGTTCGACAACCTGCGCGATCGCTCGCTGGCCGATATCTGGAATCACGGCGAGGCCTTCGCGCGTTTCCGCGGCACCG
CGTGGATGCCCGAGGTCTGCCAGGGTTGCCCGAAGCGGGAGATCGACTGGGGCGGTTGCCGCTGCCAGGCACTGGCCCTG
GCCGGCGATGCCGCCACCCTGGACCCGGTCTGCGAACGCTCCCCGGCCCATGCCGGGATCCGCGCCACCGCCGAACGCGA
GGCCGCATCGCCGGCACCGGATTTCGTCTATCGCCGGCCGGAGCGTCCTGCCGCCGTTGCCGCCGAGGCCGCAATCAGCG
ACACCGAATGA

Upstream 100 bases:

>100_bases
CGCAGACGCTGGCCGCCGAATTCGATGCCGATGCGAGCGAGATCGAGACCGACGTGATCGAACTCACCACCACCTTGCAC
CAGAAGCGCTTGCTGCGGTT

Downstream 100 bases:

>100_bases
GCCGCTGGCGGCACGCGGCCGAGCGTCTACACTAGCCGCCTCTCTCTCCGGGTTGCCTCCATGTCGTTCGCGCGCCGCGT
TCCCCTCCTGGTTTGCCTGA

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSTVPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLEQAAEMGVLQAHFSGGEPMLRKDLPELVAHARA
LGLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPAGADHIAGYRNSLSKKRAFAAAVRARGLPLTLNAVIHRHNA
ERVPGMIALALEWGAERIEVAHTQYYGWGLRNRAALMPSREQLAATIVAVETARRSLGDQLAIDFVTPDYYARQPKPCMG
GWAQRFVNISPRGDVLPCHAAETIDGLQFDNLRDRSLADIWNHGEAFARFRGTAWMPEVCQGCPKREIDWGGCRCQALAL
AGDAATLDPVCERSPAHAGIRATAEREAASPAPDFVYRRPERPAAVAAEAAISDTE

Sequences:

>Translated_376_residues
MSTVPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLEQAAEMGVLQAHFSGGEPMLRKDLPELVAHARA
LGLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPAGADHIAGYRNSLSKKRAFAAAVRARGLPLTLNAVIHRHNA
ERVPGMIALALEWGAERIEVAHTQYYGWGLRNRAALMPSREQLAATIVAVETARRSLGDQLAIDFVTPDYYARQPKPCMG
GWAQRFVNISPRGDVLPCHAAETIDGLQFDNLRDRSLADIWNHGEAFARFRGTAWMPEVCQGCPKREIDWGGCRCQALAL
AGDAATLDPVCERSPAHAGIRATAEREAASPAPDFVYRRPERPAAVAAEAAISDTE
>Mature_375_residues
STVPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLEQAAEMGVLQAHFSGGEPMLRKDLPELVAHARAL
GLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPAGADHIAGYRNSLSKKRAFAAAVRARGLPLTLNAVIHRHNAE
RVPGMIALALEWGAERIEVAHTQYYGWGLRNRAALMPSREQLAATIVAVETARRSLGDQLAIDFVTPDYYARQPKPCMGG
WAQRFVNISPRGDVLPCHAAETIDGLQFDNLRDRSLADIWNHGEAFARFRGTAWMPEVCQGCPKREIDWGGCRCQALALA
GDAATLDPVCERSPAHAGIRATAEREAASPAPDFVYRRPERPAAVAAEAAISDTE

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PQQE_XANC8 (Q4UXI4)

Other databases:

- EMBL:   CP000050
- RefSeq:   YP_242259.1
- ProteinModelPortal:   Q4UXI4
- STRING:   Q4UXI4
- GeneID:   3382178
- GenomeReviews:   CP000050_GR
- KEGG:   xcb:XC_1169
- eggNOG:   COG0535
- HOGENOM:   HBG289337
- OMA:   NVQYYGW
- ProtClustDB:   PRK05301
- BioCyc:   XCAM314565:XC_1169-MONOMER
- HAMAP:   MF_00660
- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197
- Gene3D:   G3DSA:3.20.20.70
- PIRSF:   PIRSF037420
- SMART:   SM00729
- TIGRFAMs:   TIGR02109

Pfam domain/function: PF04055 Radical_SAM

EC number: NA

Molecular weight: Translated: 40720; Mature: 40589

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLEQAAEMGVLQAHF
CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
SGGEPMLRKDLPELVAHARALGLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCC
GADHIAGYRNSLSKKRAFAAAVRARGLPLTLNAVIHRHNAERVPGMIALALEWGAERIEV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHCCCEEEEEEHHCCHHEEE
AHTQYYGWGLRNRAALMPSREQLAATIVAVETARRSLGDQLAIDFVTPDYYARQPKPCMG
HHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCCC
GWAQRFVNISPRGDVLPCHAAETIDGLQFDNLRDRSLADIWNHGEAFARFRGTAWMPEVC
HHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHCCCCCCHHHH
QGCPKREIDWGGCRCQALALAGDAATLDPVCERSPAHAGIRATAEREAASPAPDFVYRRP
CCCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCHHHCCCC
ERPAAVAAEAAISDTE
CCCHHHHHHHHCCCCC
>Mature Secondary Structure 
STVPPPLSVLLELTHRCPLACPYCSNPIALAALREEMDTAGWRSLLEQAAEMGVLQAHF
CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
SGGEPMLRKDLPELVAHARALGLYSNLITSGVAGGEPMLDQLQAAGLEHVQLSVQDVDPA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEECCCCC
GADHIAGYRNSLSKKRAFAAAVRARGLPLTLNAVIHRHNAERVPGMIALALEWGAERIEV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCHHHCCCEEEEEEHHCCHHEEE
AHTQYYGWGLRNRAALMPSREQLAATIVAVETARRSLGDQLAIDFVTPDYYARQPKPCMG
HHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCCC
GWAQRFVNISPRGDVLPCHAAETIDGLQFDNLRDRSLADIWNHGEAFARFRGTAWMPEVC
HHHHHHCCCCCCCCEEECCHHHHHCCCCCCCCCCCHHHHHHHCHHHHHHHCCCCCCHHHH
QGCPKREIDWGGCRCQALALAGDAATLDPVCERSPAHAGIRATAEREAASPAPDFVYRRP
CCCCCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCCHHHHHHCCCCCCHHHCCCC
ERPAAVAAEAAISDTE
CCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA