| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is btuB [H]
Identifier: 66767443
GI number: 66767443
Start: 1350216
End: 1352597
Strand: Reverse
Name: btuB [H]
Synonym: XC_1115
Alternate gene names: 66767443
Gene position: 1352597-1350216 (Counterclockwise)
Preceding gene: 66767446
Following gene: 66767442
Centisome position: 26.27
GC content: 66.46
Gene sequence:
>2382_bases ATGAATACCCCGCTGTCCACGCTTGCGACCGCCATCGTCGCCGCGCTGCTTGCCTCCCCCGCCCTCGCCCAGAACGCCCC GGCGGCCACCGCCAACACCCTGGACACGGTCATCGTCACCGGTACCCGCGTGTCCGACCGCACCGTGGCCGAGTCGCAAT CGCCTATCGACATCATCAGCGCCGAGTCGCTGCAGGCCACCGGCACCTCCGAGCTGGCCACTGCGCTGGCGCGTGCGCTG CCCTCGCTGAACTTCCCGCGTCCGGCGCTGAGCGATGGCACCAGCGCGATCCGCCCCGCCCAGCTGCGCGGGCTCTCGCC CGACCAGGTGCTGGTGCTGGTCAATGGCAAGCGCCGCCACACCTCGTCGCTGCTCAACCTCAACGGCACCATCGGCCGCG GCGCTGCGGCAGTGGATCTGAACACCATTCCGGTAGCGGCCATCGCGCGCGTGGAAGTGCTGCGTGACGGCGCGTCGGCG CAATACGGCTCCGACGCCATCGCCGGTGTGGTCAACATCGTGCTCAAGGGCGCGGAAAAGGGCGGCAGCCTGCAAGCCGG GTTCGGCCAGTATTCGGCCGGCGACGGCAGCAACTATGAGCTGTCCGGCGACACCGGCGTGGCCTACGGCGGCGACCGCG GCTGGCTGCACGTGGCCGCCCAGCTCAACCAGCAGGACCCGACCGACCGCGCCCGCGCCTACGCCGGCGCACCCAGCGCC TCGCAGCCCGCCGTTGGCCAGAAGGCCTTCAAGATCGGCGACCCCGACGTCAACGCACAGGCGTTGTCGGCCAACACCGA ATTCAACTTCAGCGACAGCATCACCGGCTACGCATTCGCCACCGCGAGCAACCGCGACATCACCTCGTTCGCGTTCTACC GCGCGCCGGGCAGCACCGCGCAGAACATCCTGTCGATCTATCCGCAGGGCTTCCTGCCGGAAATCCAGACCTACGCCAAG GACCGCTCGGTGGTCGCCGGCGTGCGCGGCTCCACCGCCAGCGGCTGGGACTGGGATGCCAGCTACAACTACGGCTACAA CAAGATCGATTTCCACACCCGCAACACGCTCAATGTGAGCCTGGGGCCGACCTCGCCCACGTCGTTCTATGACGGCGCGC TGGAAACCACGCAGAACATCGTCAACCTCGACGTCAAGCGCGGGTTCGATTGGGGCCTGGCGTATCCGGTCACGGTGGCG TTCGGCGCCGAATACCGCAACGAGAAGTGGAACCAGTCGCCGGGCGAAGTGGGCTCCTATTTCCAGAGCGGCACGCTGGC CGGTGGCGCGCAGGGCTTCGGTGGGTTTGCACCGAGTGTGTCCGGGCAGTACTCGCGCGACAGCTACGCGCTGTATGCCG ACATCGAAGCCGACTTCACCGACAAGTTCTCCGCCGGCCTGGCCGGGCGCTACGAGGACTACAGCGATTTCGGCAGCCAG GCATCGGGCAAGTTGTCGGCGCGCTATGCGTTCACCGACAAGGTCGCCTTGCGCGGTACGGTGTCGTCGGGCTTCCGCGC ACCGTCGCTGGCGCAGCAGTATTTCCAGTCCACCAGCACCACCTTCCTGGCCGGCAATCCGAACCCGTTCGAGATCCGTA CCTTCCCGGCCGACAGCACGGTGGCACGCGCGCTCGGCGCCGAGCCGCTGGATGCGGAGACCTCACTCTCCTACAGCCTG GGCCTGGTATTGCAGCCGACCGACGCGCTGTACGTCACCGTGGATGCGTACCAGATCGATGTAGACGACCGCATCGTGCT GTCGTCCAACCTCACCGGTACCGGCGTGCGTTCGCTGCTGGAATCGCAAGGCATCTTCGGCATCAACGGCGGCCGTTACT TCACCAATGCGGTGGACACGCGCACCCGCGGTGTCGACGTGGTGGGCAGCTACCGCTGGCAGCTCGCCGCCAGCAGCATC GACCTGACCGCCGGCTACAACTATTCAGAAACCGAAGTGCGCAGCGTGGCCGCCAACCCGGCCGCGTTGTCAGCCAACGG GTTGAGCCTGGAGCGTATCGACCGCACCGAACGTGGCCGCATCGAAGAAGGCTTCCCGCGCGACAAGTTCCTGATCAACG GCAGCTGGAATCTGGACCACTGGACACTGGCGTTGGGTGCCACGCGTTACGGTGAATACACCACGCGCCCGGCCGCGGCG ATCAACGATCAGACCTTCGGCGCCAAGTGGGTTGTGGATGCCTCGGCCAGCTACAAGATCGACCGCTGGACGCTCACCCT GGGCGCGGACAACCTGCTGGACGAGTACCCGGACGAGAACAACTTCGCCAACTCCACCAGCGGGCAATTCCCGTACAGCA ATCTGTCGCCGTTCGGTTTCAACGGTGCCTACGTGTACGGCCGCATCAACTACCGCTGGTAA
Upstream 100 bases:
>100_bases AATTAGCGCCTTCAGGTTGGCTGCGGCAGTCTTCGCCTTGCCGCGACCCCGGCCTGCCTAGCCTTGCTGGTCCCGCCAGG GCCCTCGTTTTGGAGTTGTC
Downstream 100 bases:
>100_bases GCCTTGCCATACTGCAAGTCCACACGCCCCGGCCTGCCCGGGGCGTATGCGTTTTGGGCCGCTGGCGGCTACTCCCTGCG GCCTTGTTTGCGGCATGGCG
Product: ferric enterobactin receptor
Products: NA
Alternate protein names: Cobalamin receptor; Outer membrane cobalamin translocator [H]
Number of amino acids: Translated: 793; Mature: 793
Protein sequence:
>793_residues MNTPLSTLATAIVAALLASPALAQNAPAATANTLDTVIVTGTRVSDRTVAESQSPIDIISAESLQATGTSELATALARAL PSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKRRHTSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGASA QYGSDAIAGVVNIVLKGAEKGGSLQAGFGQYSAGDGSNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAPSA SQPAVGQKAFKIGDPDVNAQALSANTEFNFSDSITGYAFATASNRDITSFAFYRAPGSTAQNILSIYPQGFLPEIQTYAK DRSVVAGVRGSTASGWDWDASYNYGYNKIDFHTRNTLNVSLGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVTVA FGAEYRNEKWNQSPGEVGSYFQSGTLAGGAQGFGGFAPSVSGQYSRDSYALYADIEADFTDKFSAGLAGRYEDYSDFGSQ ASGKLSARYAFTDKVALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPADSTVARALGAEPLDAETSLSYSL GLVLQPTDALYVTVDAYQIDVDDRIVLSSNLTGTGVRSLLESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAASSI DLTAGYNYSETEVRSVAANPAALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLDHWTLALGATRYGEYTTRPAAA INDQTFGAKWVVDASASYKIDRWTLTLGADNLLDEYPDENNFANSTSGQFPYSNLSPFGFNGAYVYGRINYRW
Sequences:
>Translated_793_residues MNTPLSTLATAIVAALLASPALAQNAPAATANTLDTVIVTGTRVSDRTVAESQSPIDIISAESLQATGTSELATALARAL PSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKRRHTSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGASA QYGSDAIAGVVNIVLKGAEKGGSLQAGFGQYSAGDGSNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAPSA SQPAVGQKAFKIGDPDVNAQALSANTEFNFSDSITGYAFATASNRDITSFAFYRAPGSTAQNILSIYPQGFLPEIQTYAK DRSVVAGVRGSTASGWDWDASYNYGYNKIDFHTRNTLNVSLGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVTVA FGAEYRNEKWNQSPGEVGSYFQSGTLAGGAQGFGGFAPSVSGQYSRDSYALYADIEADFTDKFSAGLAGRYEDYSDFGSQ ASGKLSARYAFTDKVALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPADSTVARALGAEPLDAETSLSYSL GLVLQPTDALYVTVDAYQIDVDDRIVLSSNLTGTGVRSLLESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAASSI DLTAGYNYSETEVRSVAANPAALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLDHWTLALGATRYGEYTTRPAAA INDQTFGAKWVVDASASYKIDRWTLTLGADNLLDEYPDENNFANSTSGQFPYSNLSPFGFNGAYVYGRINYRW >Mature_793_residues MNTPLSTLATAIVAALLASPALAQNAPAATANTLDTVIVTGTRVSDRTVAESQSPIDIISAESLQATGTSELATALARAL PSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKRRHTSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGASA QYGSDAIAGVVNIVLKGAEKGGSLQAGFGQYSAGDGSNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAPSA SQPAVGQKAFKIGDPDVNAQALSANTEFNFSDSITGYAFATASNRDITSFAFYRAPGSTAQNILSIYPQGFLPEIQTYAK DRSVVAGVRGSTASGWDWDASYNYGYNKIDFHTRNTLNVSLGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVTVA FGAEYRNEKWNQSPGEVGSYFQSGTLAGGAQGFGGFAPSVSGQYSRDSYALYADIEADFTDKFSAGLAGRYEDYSDFGSQ ASGKLSARYAFTDKVALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPADSTVARALGAEPLDAETSLSYSL GLVLQPTDALYVTVDAYQIDVDDRIVLSSNLTGTGVRSLLESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAASSI DLTAGYNYSETEVRSVAANPAALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLDHWTLALGATRYGEYTTRPAAA INDQTFGAKWVVDASASYKIDRWTLTLGADNLLDEYPDENNFANSTSGQFPYSNLSPFGFNGAYVYGRINYRW
Specific function: Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=612, Percent_Identity=23.6928104575163, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1790405, Length=310, Percent_Identity=27.0967741935484, Blast_Score=79, Evalue=8e-16, Organism=Escherichia coli, GI1786798, Length=637, Percent_Identity=24.0188383045526, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010101 - InterPro: IPR010916 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 84397; Mature: 84397
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.1 %Met (Translated Protein) 0.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.1 %Met (Mature Protein) 0.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPLSTLATAIVAALLASPALAQNAPAATANTLDTVIVTGTRVSDRTVAESQSPIDIIS CCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCEEEEE AESLQATGTSELATALARALPSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKRRH CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCC TSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGASAQYGSDAIAGVVNIVLKGAEK CHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC GGSLQAGFGQYSAGDGSNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAPSA CCCEECCCCCCCCCCCCCEEECCCCCEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCCC SQPAVGQKAFKIGDPDVNAQALSANTEFNFSDSITGYAFATASNRDITSFAFYRAPGSTA CCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHH QNILSIYPQGFLPEIQTYAKDRSVVAGVRGSTASGWDWDASYNYGYNKIDFHTRNTLNVS HHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE LGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVTVAFGAEYRNEKWNQSPGEVGSY ECCCCCCHHCCCHHHHHHHHEEEEECCCCCCCCCCEEEEEECCHHCCCCCCCCCCHHHHH FQSGTLAGGAQGFGGFAPSVSGQYSRDSYALYADIEADFTDKFSAGLAGRYEDYSDFGSQ HHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHCCC ASGKLSARYAFTDKVALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPADST CCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEECCCHH VARALGAEPLDAETSLSYSLGLVLQPTDALYVTVDAYQIDVDDRIVLSSNLTGTGVRSLL HHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCHHHHHHHH ESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAASSIDLTAGYNYSETEVRSVAANP HHCCEEEECCCEEEECCHHCCCCCEEEEECEEEEEEECEEEEEECCCCCHHHHHHHHCCC AALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLDHWTLALGATRYGEYTTRPAAA CEEECCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC INDQTFGAKWVVDASASYKIDRWTLTLGADNLLDEYPDENNFANSTSGQFPYSNLSPFGF CCCCCCCEEEEEECCCCEEEEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC NGAYVYGRINYRW CCEEEEEEEEECC >Mature Secondary Structure MNTPLSTLATAIVAALLASPALAQNAPAATANTLDTVIVTGTRVSDRTVAESQSPIDIIS CCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCEEEEECCCCCCCHHHCCCCCEEEEE AESLQATGTSELATALARALPSLNFPRPALSDGTSAIRPAQLRGLSPDQVLVLVNGKRRH CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCC TSSLLNLNGTIGRGAAAVDLNTIPVAAIARVEVLRDGASAQYGSDAIAGVVNIVLKGAEK CHHHEECCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC GGSLQAGFGQYSAGDGSNYELSGDTGVAYGGDRGWLHVAAQLNQQDPTDRARAYAGAPSA CCCEECCCCCCCCCCCCCEEECCCCCEEECCCCCEEEEEEECCCCCCHHHHHHCCCCCCC SQPAVGQKAFKIGDPDVNAQALSANTEFNFSDSITGYAFATASNRDITSFAFYRAPGSTA CCCCCCCCEEECCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHH QNILSIYPQGFLPEIQTYAKDRSVVAGVRGSTASGWDWDASYNYGYNKIDFHTRNTLNVS HHHHHHCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEE LGPTSPTSFYDGALETTQNIVNLDVKRGFDWGLAYPVTVAFGAEYRNEKWNQSPGEVGSY ECCCCCCHHCCCHHHHHHHHEEEEECCCCCCCCCCEEEEEECCHHCCCCCCCCCCHHHHH FQSGTLAGGAQGFGGFAPSVSGQYSRDSYALYADIEADFTDKFSAGLAGRYEDYSDFGSQ HHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCCCCHHHHCCC ASGKLSARYAFTDKVALRGTVSSGFRAPSLAQQYFQSTSTTFLAGNPNPFEIRTFPADST CCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCEEEEEECCCHH VARALGAEPLDAETSLSYSLGLVLQPTDALYVTVDAYQIDVDDRIVLSSNLTGTGVRSLL HHHHHCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCEEEEECCCCHHHHHHHH ESQGIFGINGGRYFTNAVDTRTRGVDVVGSYRWQLAASSIDLTAGYNYSETEVRSVAANP HHCCEEEECCCEEEECCHHCCCCCEEEEECEEEEEEECEEEEEECCCCCHHHHHHHHCCC AALSANGLSLERIDRTERGRIEEGFPRDKFLINGSWNLDHWTLALGATRYGEYTTRPAAA CEEECCCCCHHHHCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCCCCCC INDQTFGAKWVVDASASYKIDRWTLTLGADNLLDEYPDENNFANSTSGQFPYSNLSPFGF CCCCCCCEEEEEECCCCEEEEEEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC NGAYVYGRINYRW CCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11598060 [H]