| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is rhbC [H]
Identifier: 66767432
GI number: 66767432
Start: 1330930
End: 1332699
Strand: Reverse
Name: rhbC [H]
Synonym: XC_1104
Alternate gene names: 66767432
Gene position: 1332699-1330930 (Counterclockwise)
Preceding gene: 66767433
Following gene: 66767431
Centisome position: 25.88
GC content: 67.85
Gene sequence:
>1770_bases ATGTCGCCGCACACGATGCCTGACCCCTGGTTCGACAGCATGGCCGATGCACAGGCCTGCGCCTGCTGGTTGAATTGCTA CCTGCGCGAGTTCGCCATCCCGCGTGGTACTGCCGACTTCGACTACACCGGCCCGGATCGCCCCGGCGCACGCACCGCCG ACGACCGCTGGCTGCGGATCGCATTGGGGGACGCGGGCGTGCTGTGCGTGCGCATTGCCCATGCTGACCGGCTGGGGCGC TGCCGGTTCGTGTCCACGCCGTTCCTCAAGGCCGCCGGGCAGCCCTGGCAAAGCCTGGACGGGCATGCATTGGCGCGCAG TCTGCTACAGGCGCTGGGCAGCACGCATGCGGTCAACCCGGAACTGTTGGCGCAAAGCGACAACAGCGTGGCGATCACCG CCGCGTTACTGCGCCAGGCACAGGCCGCCACGCCCACCGGCGATACGTTGATCGATGCCGAACAGGCCTTGCTGTGGGGC CACGCACTGCACCCCACGCCCAAAAGCCGCGAAGGTGTGGCGCTGGCGCAGGTCCTGGCCTGCGCACCGGAAGCACGTGC GGCGTTTGCGTTGTACTGGTTCCGCATCGACCGGCGCCTGCTGCGCGTGCAGGGCCGCGATGTGCGTGCCACCTTGCAAC AGCTCAGCGGCCACGACGATTTCTACCCCTGCCACCCGTGGGAAGTGCAACGCCTGCGCGATGATCCACTGCTGCAGGAA TTGCAGGCACGCGGCGCGATCACACCCGTGGGCGTGTTGGGCGAGCCACTGCGGCCCACCTCGTCGGTGCGCACGCTGTA CCACCCGGCGCTGGCGTATTTCCTCAAGTGTTCGGTACATGTGCGCTTGACCAACTGCGTGCGCAAGAACGCCTGGTATG AGCTGGAAAGCGCGGTGGCGCTGACCCACCTGCTGGCACCGAGCTGGCAGGCACTGGCCGCGCAGGTGCCCGGCTTCGAC GTGATGCTGGAGCCGGCCGCCACCTCGCTGGATGTCACCCAGTTCGACCCGGCATTGGCCGCAGCAGATCCGCTGGCTAC GCGTGCGTTGGCCGAGAGCTTCGGCATCCTGTATCGGCAGGCGCCCACCGCTGCACAACGTGCACGCTGGCGCCCGCAAG TAGCGGCCGCACTGTTCACCTGCGATGCGCAGGGCCACAGCGTGGCCGCCGCTGCGCTGCGTGCGCACAGCGTCCGCCGC CTGGACCGGCGCACCGCCACCGTGCTGTGGTTTCGCGCATATGCCGGGCTGCTGCTGGATGGTGTGTGGAGTGCGCTATT CCAGCACGGCATTGCGCTGGAACCGCATCTGCAGAACACCGTGATCGGCTTCAGCGATGGCTGGCCCACGCGCGTGTGGA TCCGCGATCTGGAAGGCACCAAGCTGCTCGCGCAACGCTGGCCGGCTGCCCGCCTGCATGGCGTGGGCGAGCGCGCACGG CAGTCGCTGTACTACACACCCGAGCAGGCCTGGAACCGCGTGGCCTACTGCGCGCTGGTCAATAATCTGGCCGAAGCGAT CTTCCACCTGAGCGATGGCGATGCGGTCCTGGAAGCACGCCTGTGGCAGTGCGTGGCCGAGATTGCCGCACGCTGGCAGC AGCGCAATGGCGCGCAGCCGGCGCTGCAAGGCCTGATCGACGGCGCACCGCTGCCCGGCAAGAACAACCTGGGCACGCGG CTGTTGCAACGTGCAGATCGTCAATCGGACTACACCGCCCTGCCCAACCCCATCGCGCCAATGCATGCCGTGCAGCAGGT GGCCGCATGA
Upstream 100 bases:
>100_bases CAGCGCTGGGGCCCGACCACACCGTTCCTGGCCGCCGCCCTGGCGGCCGCCGCTGCTGCGCTCACCGTCCTGGTGCGCTT TCCCTCGAGGAGAATTGCCG
Downstream 100 bases:
>100_bases GTCTGCAGATCGATGCCACGGCGGTGCGCGCAGCGGTGGCGCAGTTACGTGCGCACAGCGACGCCCCGCTATGTGCGTAC GTCTACGACCTGGCCGCACT
Product: iron transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 588
Protein sequence:
>589_residues MSPHTMPDPWFDSMADAQACACWLNCYLREFAIPRGTADFDYTGPDRPGARTADDRWLRIALGDAGVLCVRIAHADRLGR CRFVSTPFLKAAGQPWQSLDGHALARSLLQALGSTHAVNPELLAQSDNSVAITAALLRQAQAATPTGDTLIDAEQALLWG HALHPTPKSREGVALAQVLACAPEARAAFALYWFRIDRRLLRVQGRDVRATLQQLSGHDDFYPCHPWEVQRLRDDPLLQE LQARGAITPVGVLGEPLRPTSSVRTLYHPALAYFLKCSVHVRLTNCVRKNAWYELESAVALTHLLAPSWQALAAQVPGFD VMLEPAATSLDVTQFDPALAAADPLATRALAESFGILYRQAPTAAQRARWRPQVAAALFTCDAQGHSVAAAALRAHSVRR LDRRTATVLWFRAYAGLLLDGVWSALFQHGIALEPHLQNTVIGFSDGWPTRVWIRDLEGTKLLAQRWPAARLHGVGERAR QSLYYTPEQAWNRVAYCALVNNLAEAIFHLSDGDAVLEARLWQCVAEIAARWQQRNGAQPALQGLIDGAPLPGKNNLGTR LLQRADRQSDYTALPNPIAPMHAVQQVAA
Sequences:
>Translated_589_residues MSPHTMPDPWFDSMADAQACACWLNCYLREFAIPRGTADFDYTGPDRPGARTADDRWLRIALGDAGVLCVRIAHADRLGR CRFVSTPFLKAAGQPWQSLDGHALARSLLQALGSTHAVNPELLAQSDNSVAITAALLRQAQAATPTGDTLIDAEQALLWG HALHPTPKSREGVALAQVLACAPEARAAFALYWFRIDRRLLRVQGRDVRATLQQLSGHDDFYPCHPWEVQRLRDDPLLQE LQARGAITPVGVLGEPLRPTSSVRTLYHPALAYFLKCSVHVRLTNCVRKNAWYELESAVALTHLLAPSWQALAAQVPGFD VMLEPAATSLDVTQFDPALAAADPLATRALAESFGILYRQAPTAAQRARWRPQVAAALFTCDAQGHSVAAAALRAHSVRR LDRRTATVLWFRAYAGLLLDGVWSALFQHGIALEPHLQNTVIGFSDGWPTRVWIRDLEGTKLLAQRWPAARLHGVGERAR QSLYYTPEQAWNRVAYCALVNNLAEAIFHLSDGDAVLEARLWQCVAEIAARWQQRNGAQPALQGLIDGAPLPGKNNLGTR LLQRADRQSDYTALPNPIAPMHAVQQVAA >Mature_588_residues SPHTMPDPWFDSMADAQACACWLNCYLREFAIPRGTADFDYTGPDRPGARTADDRWLRIALGDAGVLCVRIAHADRLGRC RFVSTPFLKAAGQPWQSLDGHALARSLLQALGSTHAVNPELLAQSDNSVAITAALLRQAQAATPTGDTLIDAEQALLWGH ALHPTPKSREGVALAQVLACAPEARAAFALYWFRIDRRLLRVQGRDVRATLQQLSGHDDFYPCHPWEVQRLRDDPLLQEL QARGAITPVGVLGEPLRPTSSVRTLYHPALAYFLKCSVHVRLTNCVRKNAWYELESAVALTHLLAPSWQALAAQVPGFDV MLEPAATSLDVTQFDPALAAADPLATRALAESFGILYRQAPTAAQRARWRPQVAAALFTCDAQGHSVAAAALRAHSVRRL DRRTATVLWFRAYAGLLLDGVWSALFQHGIALEPHLQNTVIGFSDGWPTRVWIRDLEGTKLLAQRWPAARLHGVGERARQ SLYYTPEQAWNRVAYCALVNNLAEAIFHLSDGDAVLEARLWQCVAEIAARWQQRNGAQPALQGLIDGAPLPGKNNLGTRL LQRADRQSDYTALPNPIAPMHAVQQVAA
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 64729; Mature: 64598
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPHTMPDPWFDSMADAQACACWLNCYLREFAIPRGTADFDYTGPDRPGARTADDRWLRI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE ALGDAGVLCVRIAHADRLGRCRFVSTPFLKAAGQPWQSLDGHALARSLLQALGSTHAVNP EECCCCEEEEEEECCCCCCCEEEECCHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCCH ELLAQSDNSVAITAALLRQAQAATPTGDTLIDAEQALLWGHALHPTPKSREGVALAQVLA HHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH CAPEARAAFALYWFRIDRRLLRVQGRDVRATLQQLSGHDDFYPCHPWEVQRLRDDPLLQE HCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHH LQARGAITPVGVLGEPLRPTSSVRTLYHPALAYFLKCSVHVRLTNCVRKNAWYELESAVA HHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHH LTHLLAPSWQALAAQVPGFDVMLEPAATSLDVTQFDPALAAADPLATRALAESFGILYRQ HHHHHCCCHHHHHHCCCCCEEEECCCCCCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHC APTAAQRARWRPQVAAALFTCDAQGHSVAAAALRAHSVRRLDRRTATVLWFRAYAGLLLD CCCHHHHHCCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVWSALFQHGIALEPHLQNTVIGFSDGWPTRVWIRDLEGTKLLAQRWPAARLHGVGERAR HHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCHHHHHHCCHHHHHCCCHHHH QSLYYTPEQAWNRVAYCALVNNLAEAIFHLSDGDAVLEARLWQCVAEIAARWQQRNGAQP HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH ALQGLIDGAPLPGKNNLGTRLLQRADRQSDYTALPNPIAPMHAVQQVAA HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SPHTMPDPWFDSMADAQACACWLNCYLREFAIPRGTADFDYTGPDRPGARTADDRWLRI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEE ALGDAGVLCVRIAHADRLGRCRFVSTPFLKAAGQPWQSLDGHALARSLLQALGSTHAVNP EECCCCEEEEEEECCCCCCCEEEECCHHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCCH ELLAQSDNSVAITAALLRQAQAATPTGDTLIDAEQALLWGHALHPTPKSREGVALAQVLA HHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH CAPEARAAFALYWFRIDRRLLRVQGRDVRATLQQLSGHDDFYPCHPWEVQRLRDDPLLQE HCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHH LQARGAITPVGVLGEPLRPTSSVRTLYHPALAYFLKCSVHVRLTNCVRKNAWYELESAVA HHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHH LTHLLAPSWQALAAQVPGFDVMLEPAATSLDVTQFDPALAAADPLATRALAESFGILYRQ HHHHHCCCHHHHHHCCCCCEEEECCCCCCCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHC APTAAQRARWRPQVAAALFTCDAQGHSVAAAALRAHSVRRLDRRTATVLWFRAYAGLLLD CCCHHHHHCCCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVWSALFQHGIALEPHLQNTVIGFSDGWPTRVWIRDLEGTKLLAQRWPAARLHGVGERAR HHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCHHHHHHCCHHHHHCCCHHHH QSLYYTPEQAWNRVAYCALVNNLAEAIFHLSDGDAVLEARLWQCVAEIAARWQQRNGAQP HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCH ALQGLIDGAPLPGKNNLGTRLLQRADRQSDYTALPNPIAPMHAVQQVAA HHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]