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The map label for this gene is yhbQ [C]

Identifier: 66767414

GI number: 66767414

Start: 1310215

End: 1310523

Strand: Reverse

Name: yhbQ [C]

Synonym: XC_1086

Alternate gene names: 66767414

Gene position: 1310523-1310215 (Counterclockwise)

Preceding gene: 66767431

Following gene: 66767413

Centisome position: 25.45

GC content: 68.28

Gene sequence:

>309_bases
ATGGATGCACCCAAGCCCTGGCACCTCTATCTGCTGCTCTGTCGCAATGGCAGCTACTACGCCGGGATCACCAACGATCT
GGAGCGGCGCTTCCAGGCGCATCTGCGTGGCACCGGCGCCCGCTACACACGTGCGAACCCGCCACTGCAGGTGCTGGCCA
GCCATCCCTATCCGGACCGGGCCACCGCTTCACGCGCGGAGTGGTTGCTCAAGCAGCAGCCGCGCGCACGCAAGCTGGCC
TGGTTGCAGGCACAGGGCCTGCTGCCTGCCGAGTCACGGCCCGACGACACGCCGCTCACGCCCGCCTAG

Upstream 100 bases:

>100_bases
TGGTGGTTATTCGCTCACGCACGCAACCGTCTGTGTTGCAGCCGGCGCACGCAATGCGCGCGCGGCTGTGCAGCGCGCAC
GAAGCGGCGATAATGCGCCG

Downstream 100 bases:

>100_bases
CCGTTGATTGCCTAGCCTGCCCTGCCTTCTCCTGGAGCAGCGCATGCATTACCAGCTCTATTATTGGACCGGCCTGCAGG
GCCGCGGCGAATTTGTCCGC

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDAPKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPLQVLASHPYPDRATASRAEWLLKQQPRARKLA
WLQAQGLLPAESRPDDTPLTPA

Sequences:

>Translated_102_residues
MDAPKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPLQVLASHPYPDRATASRAEWLLKQQPRARKLA
WLQAQGLLPAESRPDDTPLTPA
>Mature_102_residues
MDAPKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPLQVLASHPYPDRATASRAEWLLKQQPRARKLA
WLQAQGLLPAESRPDDTPLTPA

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family

Homologues:

Organism=Escherichia coli, GI1789545, Length=73, Percent_Identity=42.4657534246575, Blast_Score=65, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1086_XANC8 (Q4UXR7)

Other databases:

- EMBL:   CP000050
- RefSeq:   YP_242176.1
- ProteinModelPortal:   Q4UXR7
- SMR:   Q4UXR7
- STRING:   Q4UXR7
- GeneID:   3382258
- GenomeReviews:   CP000050_GR
- KEGG:   xcb:XC_1086
- eggNOG:   COG2827
- HOGENOM:   HBG678874
- OMA:   EKEATHE
- PhylomeDB:   Q4UXR7
- ProtClustDB:   PRK00329
- BioCyc:   XCAM314565:XC_1086-MONOMER
- GO:   GO:0005622
- InterPro:   IPR000305

Pfam domain/function: PF01541 GIY-YIG; SSF82771 UvrC_N

EC number: NA

Molecular weight: Translated: 11575; Mature: 11575

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPLQVLASHPYPDR
CCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
ATASRAEWLLKQQPRARKLAWLQAQGLLPAESRPDDTPLTPA
CHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDAPKPWHLYLLLCRNGSYYAGITNDLERRFQAHLRGTGARYTRANPPLQVLASHPYPDR
CCCCCCEEEEEEEECCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
ATASRAEWLLKQQPRARKLAWLQAQGLLPAESRPDDTPLTPA
CHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA