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The map label for this gene is ygfA [C]

Identifier: 66767233

GI number: 66767233

Start: 1084417

End: 1085007

Strand: Reverse

Name: ygfA [C]

Synonym: XC_0901

Alternate gene names: 66767233

Gene position: 1085007-1084417 (Counterclockwise)

Preceding gene: 66767234

Following gene: 66767232

Centisome position: 21.07

GC content: 70.9

Gene sequence:

>591_bases
ATGTCCGACGACCGAGATGCGCTGCGTCAGCAATTACGTGCCGCGCGGCGCAGCCTGCCCGCTGCGCAACGCCTCGCCGC
CGCCGACGCGCTGGCCGAGCGTCTGCTGGCGCTGCCGTTTGCACCGCAGCAGGGCGCGGTGGCCGGCTACTGGGCGATGG
ATGGTGAGATCGCGCTGCACCGCTGGCAACTGAGCCTGCCGCAGGGCGTGCGCTATTGCCTGCCGGTGCTGGACGGGCGC
GTGCTGCGCTTTGCACCGTGGAAGCCGGGCCAGGGCCTGGTCAGCAATCGCTATGGCATCCCCGAGCCAGACGTGGACCG
CGCCGACACGCTGGGCCCGGAAGACATGGACCTGGTGGTGACGCCGTTGACCGGCTTCGACGCCGCCTGCGGGCGCTTGG
GCATGGGAGGCGGCTGGTATGATCGCAGCTTCGCGTTCCGGCATCGCCAGGCGCCGCCGCCCTGGCTGGTCGGCGTGGGC
TTTGCCGCGCAGCAGGTTCCCGCCTTGCCCGTCGCCGCCTGGGACGTGCCGGTGGATGCCATCTGCACCGAACACGCCAC
CTTCCTGAAAGACGACACCGCTCCCGCATGA

Upstream 100 bases:

>100_bases
GCGGCAGGTTGCGATCAGTCATCCACGCATCAACACCGCGCAGCTAGGCATGCGCGCGCCCGCGGCCGACAATGCCGCTT
CCCTTTGCGCCGAGATCCCG

Downstream 100 bases:

>100_bases
CTGCCCGCAAGCGCTATTGGCTGATGAAGTCCGAGCCGGACACGTTTTCCATCGATGACCTGGAGCGCGTTGGCACCGAG
CCGTGGAACGGCGTGCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSDDRDALRQQLRAARRSLPAAQRLAAADALAERLLALPFAPQQGAVAGYWAMDGEIALHRWQLSLPQGVRYCLPVLDGR
VLRFAPWKPGQGLVSNRYGIPEPDVDRADTLGPEDMDLVVTPLTGFDAACGRLGMGGGWYDRSFAFRHRQAPPPWLVGVG
FAAQQVPALPVAAWDVPVDAICTEHATFLKDDTAPA

Sequences:

>Translated_196_residues
MSDDRDALRQQLRAARRSLPAAQRLAAADALAERLLALPFAPQQGAVAGYWAMDGEIALHRWQLSLPQGVRYCLPVLDGR
VLRFAPWKPGQGLVSNRYGIPEPDVDRADTLGPEDMDLVVTPLTGFDAACGRLGMGGGWYDRSFAFRHRQAPPPWLVGVG
FAAQQVPALPVAAWDVPVDAICTEHATFLKDDTAPA
>Mature_195_residues
SDDRDALRQQLRAARRSLPAAQRLAAADALAERLLALPFAPQQGAVAGYWAMDGEIALHRWQLSLPQGVRYCLPVLDGRV
LRFAPWKPGQGLVSNRYGIPEPDVDRADTLGPEDMDLVVTPLTGFDAACGRLGMGGGWYDRSFAFRHRQAPPPWLVGVGF
AAQQVPALPVAAWDVPVDAICTEHATFLKDDTAPA

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=178, Percent_Identity=35.9550561797753, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21281; Mature: 21150

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDRDALRQQLRAARRSLPAAQRLAAADALAERLLALPFAPQQGAVAGYWAMDGEIALH
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEE
RWQLSLPQGVRYCLPVLDGRVLRFAPWKPGQGLVSNRYGIPEPDVDRADTLGPEDMDLVV
EEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TPLTGFDAACGRLGMGGGWYDRSFAFRHRQAPPPWLVGVGFAAQQVPALPVAAWDVPVDA
ECCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEECCCHHHHCCCCCEEECCCCHHH
ICTEHATFLKDDTAPA
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SDDRDALRQQLRAARRSLPAAQRLAAADALAERLLALPFAPQQGAVAGYWAMDGEIALH
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEE
RWQLSLPQGVRYCLPVLDGRVLRFAPWKPGQGLVSNRYGIPEPDVDRADTLGPEDMDLVV
EEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TPLTGFDAACGRLGMGGGWYDRSFAFRHRQAPPPWLVGVGFAAQQVPALPVAAWDVPVDA
ECCCCCHHHHHCCCCCCCCCCCCHHHHHCCCCCCEEEECCCHHHHCCCCCEEECCCCHHH
ICTEHATFLKDDTAPA
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]