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The map label for this gene is 66767200

Identifier: 66767200

GI number: 66767200

Start: 1046446

End: 1047567

Strand: Reverse

Name: 66767200

Synonym: XC_0868

Alternate gene names: NA

Gene position: 1047567-1046446 (Counterclockwise)

Preceding gene: 66767202

Following gene: 66767199

Centisome position: 20.35

GC content: 59.8

Gene sequence:

>1122_bases
ATGGACGTTTTTTTTCATGGCGCGGCAAGCTGGCTGCAGCCGCTTGCGGACGCCAATCTCGGCGACTTCGTTTTCTTCAA
GCTGGTCAACGATTACTTCAACCGGGAAATCCAGGAATTTGGCCTTGAGCTGATGAAGCGGGCCATGAAGTGGGTCAGCG
CGATCGCGCTGACGGTCACCACGCTGTGGGTGCTGATCTTGGGTTACCGCATCGCCACCGGGCAGTCGCGCGAGAGCGCG
ATGGCCACCATGATCAAGGCCGCCAAGGTTGCAATCATCATCAGCCTGGCCTCGGCCCTCGGGGTCAACGGCGCCATGCT
GCACCAGACCATGACCGAGAACCTGGACAAGGAAATCCATCGCCTGTTCACAGGCGATGAGGGCACCGCCGCCGATGCCA
TCGACGAGAACCTGGCCTACACACAGGTCGCAATGGCCACACTGGATGCGGTGCGCGTAGATCCGGCCCAGCCGGAAGTG
CTGGAGAAAAAAGGTCGCGCCATGCTCATGGCAGGCTTCGGTACCGCCAGCCCACCGATGGCCGCAGGCGCGATGCTGTT
GCTGTTCAAGTTCACCATGGCCTTCTTGATCGGCATCGGGCCGATCTTCATCCTGGCGCTGGTCTTCGACCAGACCAAGG
ACCTGTTCAAGAAGTGGCTGTTCTACGTCATCGGCACCTTGTTCTCGATGTCCATGCTGTCGGTGGTGACGGCCATGGTG
CTCAAGTTCACTGCCAAGGTGGCCGCCGCCTACTGGGCGGTCAAGTTCATCCCCCTGGCCAGCGCCGAAGGCCTCTCCAG
CCAGGCGCTGCAGCAGGGTGGCATCGGCCTGATCATGACCATGCTCATCGTCACCGTACCCACCATCGCCGCCGCACTAT
GGCAGGGCAATATGGGCACGTTCATGGCCTACTCGGCGTTTGGGGCTGCAGCAAGCCCAGGACCACAGGGGCAGCCGGCT
GGGTCGTATATGCCTAGGCAAGATGCGCCGAATGGAGACAGCAAAGCTAGCTCCAATATAAACACTACTAGGGCAGCTAC
AGGCACCCCCGCTGATTCTCAGCAAGTAGCACCCAGTTACGTTGGTAACGCTATAAAGAATAATGACGGCCGTCTTCTGT
AG

Upstream 100 bases:

>100_bases
GACATCAAGGCCTTGCGGGCGTTGGGTGATTGGGGGTTTTTCAGGGGCGACGAATTAGCGGGCAACCAAAGCCCAGATCA
CGACGCACAGGCAAACAGCA

Downstream 100 bases:

>100_bases
CAGAATATATGGAACTAACAACATTTACGCCATCATTATCACAAGCAAAAATATATTTACGAATTATAAATGAATAAGAA
AATCGTAACTTTAATCCTTT

Product: VirB6 protein

Products: NA

Alternate protein names: Type IV Secretion System; VirB6-Like Membrane Protein; Virb6 Protein; TrbL/VirB6 Plasmid Conjugal Transfer Protein; Type IV Secretion System Transmembrane Protein

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MDVFFHGAASWLQPLADANLGDFVFFKLVNDYFNREIQEFGLELMKRAMKWVSAIALTVTTLWVLILGYRIATGQSRESA
MATMIKAAKVAIIISLASALGVNGAMLHQTMTENLDKEIHRLFTGDEGTAADAIDENLAYTQVAMATLDAVRVDPAQPEV
LEKKGRAMLMAGFGTASPPMAAGAMLLLFKFTMAFLIGIGPIFILALVFDQTKDLFKKWLFYVIGTLFSMSMLSVVTAMV
LKFTAKVAAAYWAVKFIPLASAEGLSSQALQQGGIGLIMTMLIVTVPTIAAALWQGNMGTFMAYSAFGAAASPGPQGQPA
GSYMPRQDAPNGDSKASSNINTTRAATGTPADSQQVAPSYVGNAIKNNDGRLL

Sequences:

>Translated_373_residues
MDVFFHGAASWLQPLADANLGDFVFFKLVNDYFNREIQEFGLELMKRAMKWVSAIALTVTTLWVLILGYRIATGQSRESA
MATMIKAAKVAIIISLASALGVNGAMLHQTMTENLDKEIHRLFTGDEGTAADAIDENLAYTQVAMATLDAVRVDPAQPEV
LEKKGRAMLMAGFGTASPPMAAGAMLLLFKFTMAFLIGIGPIFILALVFDQTKDLFKKWLFYVIGTLFSMSMLSVVTAMV
LKFTAKVAAAYWAVKFIPLASAEGLSSQALQQGGIGLIMTMLIVTVPTIAAALWQGNMGTFMAYSAFGAAASPGPQGQPA
GSYMPRQDAPNGDSKASSNINTTRAATGTPADSQQVAPSYVGNAIKNNDGRLL
>Mature_373_residues
MDVFFHGAASWLQPLADANLGDFVFFKLVNDYFNREIQEFGLELMKRAMKWVSAIALTVTTLWVLILGYRIATGQSRESA
MATMIKAAKVAIIISLASALGVNGAMLHQTMTENLDKEIHRLFTGDEGTAADAIDENLAYTQVAMATLDAVRVDPAQPEV
LEKKGRAMLMAGFGTASPPMAAGAMLLLFKFTMAFLIGIGPIFILALVFDQTKDLFKKWLFYVIGTLFSMSMLSVVTAMV
LKFTAKVAAAYWAVKFIPLASAEGLSSQALQQGGIGLIMTMLIVTVPTIAAALWQGNMGTFMAYSAFGAAASPGPQGQPA
GSYMPRQDAPNGDSKASSNINTTRAATGTPADSQQVAPSYVGNAIKNNDGRLL

Specific function: Unknown

COG id: COG3704

COG function: function code U; Type IV secretory pathway, VirB6 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39880; Mature: 39880

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCCCCCC
>Mature Secondary Structure
MDVFFHGAASWLQPLADANLGDFVFFKLVNDYFNREIQEFGLELMKRAMKWVSAIALTVT
CCEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLWVLILGYRIATGQSRESAMATMIKAAKVAIIISLASALGVNGAMLHQTMTENLDKEIH
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RLFTGDEGTAADAIDENLAYTQVAMATLDAVRVDPAQPEVLEKKGRAMLMAGFGTASPPM
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCEEEEECCCCCCCCH
AAGAMLLLFKFTMAFLIGIGPIFILALVFDQTKDLFKKWLFYVIGTLFSMSMLSVVTAMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKFTAKVAAAYWAVKFIPLASAEGLSSQALQQGGIGLIMTMLIVTVPTIAAALWQGNMGT
HHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCH
FMAYSAFGAAASPGPQGQPAGSYMPRQDAPNGDSKASSNINTTRAATGTPADSQQVAPSY
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHH
VGNAIKNNDGRLL
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA