| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is pucL [H]
Identifier: 66766634
GI number: 66766634
Start: 345548
End: 346039
Strand: Reverse
Name: pucL [H]
Synonym: XC_0290
Alternate gene names: 66766634
Gene position: 346039-345548 (Counterclockwise)
Preceding gene: 66766635
Following gene: 66766633
Centisome position: 6.72
GC content: 67.07
Gene sequence:
>492_bases ATGAGCGTGATCGATGCCAACGCGCTGGACACCGCCGCCTTCGTGGCGCGCTACCGCGCGCTGTTCGAGCATTCGCCGTG GGTGGTCGAACGCGCTGCGCGCCGCCGCCCGTTCGACGATGTGTTTGGCGGATTGATGCAGGTGGTGTACGACGCCTCAC CCGACGATCAGCTGGCGCTGATCCGCGCGCATCCGGAACTGGCCGGCAAGGCCGCAATCGACCGCACCCTCACCGCCGCC TCCGCCGCCGAGCAGGCCTCGGCCGGCCTGGACCGGCTCGACGAAGACGAATTCCACCGCTTTCACGCACTCAACCATGC CTACCGGCAGCGCTTTGGATTCCCCTTCGTGATCTGCGTGCGCTTGCAGGACAAGGCCGGGATCCTGGCCGAACTGCAGC GTCGCCTGGACGCACCACGCAACGACGAAATCGCCACCGCCCTCGCCGAGATCGGCAAGATCGTGCACCTGCGCCTGGAG GCATTGCCATGA
Upstream 100 bases:
>100_bases AGGGCAGCACCGCGCACGGCCGCCAGAGCCAGACCTGGGTGCGCTTTACCGATGGCTGGAAAGTGGTGGCTGCGCACGTC TCGCTGCAAGGCAGCCACGC
Downstream 100 bases:
>100_bases GCCTGGCTCAACTCGAACACGCGCTGCAACACGACCTGCAACGCCTCGCCCACGGCGGCGAACCCTGGGTGCGCCCGCGC GTGCATCCGGCCGGCCATGT
Product: hypothetical protein
Products: NA
Alternate protein names: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; OHCU decarboxylase; Uricase; Urate oxidase [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MSVIDANALDTAAFVARYRALFEHSPWVVERAARRRPFDDVFGGLMQVVYDASPDDQLALIRAHPELAGKAAIDRTLTAA SAAEQASAGLDRLDEDEFHRFHALNHAYRQRFGFPFVICVRLQDKAGILAELQRRLDAPRNDEIATALAEIGKIVHLRLE ALP
Sequences:
>Translated_163_residues MSVIDANALDTAAFVARYRALFEHSPWVVERAARRRPFDDVFGGLMQVVYDASPDDQLALIRAHPELAGKAAIDRTLTAA SAAEQASAGLDRLDEDEFHRFHALNHAYRQRFGFPFVICVRLQDKAGILAELQRRLDAPRNDEIATALAEIGKIVHLRLE ALP >Mature_162_residues SVIDANALDTAAFVARYRALFEHSPWVVERAARRRPFDDVFGGLMQVVYDASPDDQLALIRAHPELAGKAAIDRTLTAAS AAEQASAGLDRLDEDEFHRFHALNHAYRQRFGFPFVICVRLQDKAGILAELQRRLDAPRNDEIATALAEIGKIVHLRLEA LP
Specific function: Catalyzes two steps in the degradation of uric acid, i.e. the oxidation of uric acid to 5-hydroxyisourate (HIU) and the stereoselective decarboxylation of 2-oxo-4-hydroxy-4-carboxy-5- ureidoimidazoline (OHCU) to (S)-allantoin [H]
COG id: COG3195
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the uricase family [H]
Homologues:
Organism=Homo sapiens, GI157743280, Length=165, Percent_Identity=37.5757575757576, Blast_Score=100, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018020 - InterPro: IPR017580 - InterPro: IPR002042 - InterPro: IPR019842 [H]
Pfam domain/function: PF09349 OHCU_decarbox; PF01014 Uricase [H]
EC number: =1.7.3.3 [H]
Molecular weight: Translated: 18174; Mature: 18043
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVIDANALDTAAFVARYRALFEHSPWVVERAARRRPFDDVFGGLMQVVYDASPDDQLAL CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEE IRAHPELAGKAAIDRTLTAASAAEQASAGLDRLDEDEFHRFHALNHAYRQRFGFPFVICV EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE RLQDKAGILAELQRRLDAPRNDEIATALAEIGKIVHLRLEALP EECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure SVIDANALDTAAFVARYRALFEHSPWVVERAARRRPFDDVFGGLMQVVYDASPDDQLAL CCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEE IRAHPELAGKAAIDRTLTAASAAEQASAGLDRLDEDEFHRFHALNHAYRQRFGFPFVICV EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE RLQDKAGILAELQRRLDAPRNDEIATALAEIGKIVHLRLEALP EECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377; 11344136 [H]