| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66766581
Identifier: 66766581
GI number: 66766581
Start: 284918
End: 285460
Strand: Reverse
Name: 66766581
Synonym: XC_0236
Alternate gene names: NA
Gene position: 285460-284918 (Counterclockwise)
Preceding gene: 77761079
Following gene: 77761078
Centisome position: 5.54
GC content: 66.85
Gene sequence:
>543_bases ATGACACCCACCGCTTTCATTTCGGCCCGCCGCCATGCCCGTCGCCTGCTGGTGCTGCTGGCGCTGGCACTTGCCGCGCC GGTGGCCTGCGCCCAGGCGCCCAGCGATGCCGACGTCAACCGGCTGCTGGCCGCTTCGCGCGCACAGACCATGCTCGACA CCATGCTGCCGCAGATCGAAGCGATGCAGCAGCAGCAGTTCGCCCAGCTCACCGCGCAGCGCCAGCTCGATGCCGACCAG CAGGCGCTGCTGCAGCGCATCCAGGACCGCACCCGCCAGACCGTGCGCAAGGCGCTGTCGTGGTCGGAGCTGCGCCCGAT GTACGTGGACCTGTACAAGCGCTCTTTCTCGCGCGAGGACGTGATTGCCATGGCCGAGTTCTACGAGAGTTCGGCCGGCC AAAGCCTGCTGGACAAGACCCCGGCACTGACCCAGAACCTGATGGGCGCCATCCAGCAGAAGATGCTGCCGCTGTTTACC GACCTGCAGAAGGATCTGGAACAGATCGTCAACACTCCGGCGGCGCCTGCGGCGAAGCCGTGA
Upstream 100 bases:
>100_bases GGCCATGCGCCGGATTGTATCGGGACGGGCGTGGACGCGCGCGCGAACGCCAGCGTCATCCCGTATGCTGCGGCCGGTCC CCCGACTGCAGGATGCTCCG
Downstream 100 bases:
>100_bases GGGGCAGGGATTGGGGAATCGGGATTGGGGATTCGTAACCGCGTGATCGCTGCGGCGAATGCGGATGCGGATGAGCATGC GGATGCGGATGCCAGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTPTAFISARRHARRLLVLLALALAAPVACAQAPSDADVNRLLAASRAQTMLDTMLPQIEAMQQQQFAQLTAQRQLDADQ QALLQRIQDRTRQTVRKALSWSELRPMYVDLYKRSFSREDVIAMAEFYESSAGQSLLDKTPALTQNLMGAIQQKMLPLFT DLQKDLEQIVNTPAAPAAKP
Sequences:
>Translated_180_residues MTPTAFISARRHARRLLVLLALALAAPVACAQAPSDADVNRLLAASRAQTMLDTMLPQIEAMQQQQFAQLTAQRQLDADQ QALLQRIQDRTRQTVRKALSWSELRPMYVDLYKRSFSREDVIAMAEFYESSAGQSLLDKTPALTQNLMGAIQQKMLPLFT DLQKDLEQIVNTPAAPAAKP >Mature_179_residues TPTAFISARRHARRLLVLLALALAAPVACAQAPSDADVNRLLAASRAQTMLDTMLPQIEAMQQQQFAQLTAQRQLDADQQ ALLQRIQDRTRQTVRKALSWSELRPMYVDLYKRSFSREDVIAMAEFYESSAGQSLLDKTPALTQNLMGAIQQKMLPLFTD LQKDLEQIVNTPAAPAAKP
Specific function: Unknown
COG id: COG3184
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20080; Mature: 19949
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTAFISARRHARRLLVLLALALAAPVACAQAPSDADVNRLLAASRAQTMLDTMLPQIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AMQQQQFAQLTAQRQLDADQQALLQRIQDRTRQTVRKALSWSELRPMYVDLYKRSFSRED HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VIAMAEFYESSAGQSLLDKTPALTQNLMGAIQQKMLPLFTDLQKDLEQIVNTPAAPAAKP HHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TPTAFISARRHARRLLVLLALALAAPVACAQAPSDADVNRLLAASRAQTMLDTMLPQIE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH AMQQQQFAQLTAQRQLDADQQALLQRIQDRTRQTVRKALSWSELRPMYVDLYKRSFSRED HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VIAMAEFYESSAGQSLLDKTPALTQNLMGAIQQKMLPLFTDLQKDLEQIVNTPAAPAAKP HHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA