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The map label for this gene is 66048338

Identifier: 66048338

GI number: 66048338

Start: 6065915

End: 6067318

Strand: Direct

Name: 66048338

Synonym: Psyr_5114

Alternate gene names: NA

Gene position: 6065915-6067318 (Clockwise)

Preceding gene: 66048336

Following gene: NA

Centisome position: 99.54

GC content: 41.88

Gene sequence:

>1404_bases
GTGATGGCCAAAAACACCACACAACAGAATGAAGTCATCGACTACTTCGATGCGGCACTCCTCTACGTGTATGCGAATTC
CTGGCAAAGCAGGCAGAACGATGACGTGAGCAAGCTTCGTCACCTGGCGCAGCGAGTCACCGAGGCAATCGAGCATTGGC
CTATTAATCTGAGCGACGAGCTCAAGAGCAGATCCTACTACGATGTGATGGATGGTCTTCAGGCTAGAAACAGAAATAAA
ACAACCACCCCAATTTATAAAGATAGAATTTACTGGACTGCCACCTATCCGTCAGACATAAAACTTTCAAAATTATATGC
ACAGCGTCGAGACTTGCTTGTGGACATTTTCATAAAGCTTAACAATCTCGCATACGAAATAGTTGAGATATCTGAGGAAA
AATGCGAATTCTGGCAAATCGAATCTAGCATGCGAAGATATGCCCGTTTCCTGGCACAAAAACACGACTTACCTATTAAT
TACGCAATGCTTGCCAACATTGTTGCTCGACATATATACCATGCCAATCATGCTGACACGTATGGTATGCTAGACGATCC
CTCTGAATTTTTAAAGAAAATTGATATCTATGTGAAAAAATCTGAGCGAGACTTCGAACACTTCCAGCGCATGCTGCGCT
GCAGGCGCTTGATAGAAGAGCTTGAAACCGACGCCAAACAGCTTGATATAAAAATTGACAAGAATTATGAATGGGGCTTA
TTAGCAAACATCGACATAACATGCCTAAAAGTTTTAATTCTTTACAAAGAAGCAAACCTTCAGAAATCTCTTATCGACAG
CAAGTTCAACCCGGAGCAACTGGGCTCGAAGGAACCGAAAAATATAAATTTTGATCAACTTAAAACTGTACAAAAATTCT
TGAAAGCAAAAACTTCCTCACTTCCCGACTCACGTAATTACATATTCAATACAGATCATACAGATGTTCGTATTTCCGGA
TTTCGCGAGAGAGCTTCGCTAGCGTTGTGCATCCCTTTCGGTACGTCCCCCGACAAAGCTATAGCGCTGGTAAATCAGTT
CAAACAAAAAATTAGGGCGCGCATATTAGACAAGCTTGATGACATTGACGACAGATCTAAATCAGATGAAGCGAGCAAAT
TTTTTTCCGCTTGGGATGAGCCCTATAAACGTATCATGATAAAAAATAAAGGGAGCATCCTTGGACTTCTGGCCGGCTTA
TTATGTGATCATATTTTTACTTTCTGGAAAGGTGAAATCCCACCTGGCACAAAACGAAAAATAGACTCTGTAAATGACGC
TGTCGAGACCACCTTGGACATATTGAAACAACATGGATTTTTGTATGACGCCGAAACAGTTCCCAAGTCTAGGACGGCAG
CACGAAGAAAAATCGCAGCTATCCCGACGATACTAGATATTTGA

Upstream 100 bases:

>100_bases
GCCAGCCGGGTCACTAACCGACTGACAACGATTTTTCTACCAAACACATCAGCGGCCAAGGCATGATTGGTCACCACCAA
TCTGCCCATACCTAAGGAAA

Downstream 100 bases:

>100_bases
ATATGGTAAGCCAATGAACCTGGCTGGGGCCGGGACGACTGACCTCACCACCTGTTGACGCTGATGCCGAATTGACCCAT
GTGCCGACGCCAGACTAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 467

Protein sequence:

>467_residues
MMAKNTTQQNEVIDYFDAALLYVYANSWQSRQNDDVSKLRHLAQRVTEAIEHWPINLSDELKSRSYYDVMDGLQARNRNK
TTTPIYKDRIYWTATYPSDIKLSKLYAQRRDLLVDIFIKLNNLAYEIVEISEEKCEFWQIESSMRRYARFLAQKHDLPIN
YAMLANIVARHIYHANHADTYGMLDDPSEFLKKIDIYVKKSERDFEHFQRMLRCRRLIEELETDAKQLDIKIDKNYEWGL
LANIDITCLKVLILYKEANLQKSLIDSKFNPEQLGSKEPKNINFDQLKTVQKFLKAKTSSLPDSRNYIFNTDHTDVRISG
FRERASLALCIPFGTSPDKAIALVNQFKQKIRARILDKLDDIDDRSKSDEASKFFSAWDEPYKRIMIKNKGSILGLLAGL
LCDHIFTFWKGEIPPGTKRKIDSVNDAVETTLDILKQHGFLYDAETVPKSRTAARRKIAAIPTILDI

Sequences:

>Translated_467_residues
MMAKNTTQQNEVIDYFDAALLYVYANSWQSRQNDDVSKLRHLAQRVTEAIEHWPINLSDELKSRSYYDVMDGLQARNRNK
TTTPIYKDRIYWTATYPSDIKLSKLYAQRRDLLVDIFIKLNNLAYEIVEISEEKCEFWQIESSMRRYARFLAQKHDLPIN
YAMLANIVARHIYHANHADTYGMLDDPSEFLKKIDIYVKKSERDFEHFQRMLRCRRLIEELETDAKQLDIKIDKNYEWGL
LANIDITCLKVLILYKEANLQKSLIDSKFNPEQLGSKEPKNINFDQLKTVQKFLKAKTSSLPDSRNYIFNTDHTDVRISG
FRERASLALCIPFGTSPDKAIALVNQFKQKIRARILDKLDDIDDRSKSDEASKFFSAWDEPYKRIMIKNKGSILGLLAGL
LCDHIFTFWKGEIPPGTKRKIDSVNDAVETTLDILKQHGFLYDAETVPKSRTAARRKIAAIPTILDI
>Mature_467_residues
MMAKNTTQQNEVIDYFDAALLYVYANSWQSRQNDDVSKLRHLAQRVTEAIEHWPINLSDELKSRSYYDVMDGLQARNRNK
TTTPIYKDRIYWTATYPSDIKLSKLYAQRRDLLVDIFIKLNNLAYEIVEISEEKCEFWQIESSMRRYARFLAQKHDLPIN
YAMLANIVARHIYHANHADTYGMLDDPSEFLKKIDIYVKKSERDFEHFQRMLRCRRLIEELETDAKQLDIKIDKNYEWGL
LANIDITCLKVLILYKEANLQKSLIDSKFNPEQLGSKEPKNINFDQLKTVQKFLKAKTSSLPDSRNYIFNTDHTDVRISG
FRERASLALCIPFGTSPDKAIALVNQFKQKIRARILDKLDDIDDRSKSDEASKFFSAWDEPYKRIMIKNKGSILGLLAGL
LCDHIFTFWKGEIPPGTKRKIDSVNDAVETTLDILKQHGFLYDAETVPKSRTAARRKIAAIPTILDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54416; Mature: 54416

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAKNTTQQNEVIDYFDAALLYVYANSWQSRQNDDVSKLRHLAQRVTEAIEHWPINLSDE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
LKSRSYYDVMDGLQARNRNKTTTPIYKDRIYWTATYPSDIKLSKLYAQRRDLLVDIFIKL
HHCCHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
NNLAYEIVEISEEKCEFWQIESSMRRYARFLAQKHDLPINYAMLANIVARHIYHANHADT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
YGMLDDPSEFLKKIDIYVKKSERDFEHFQRMLRCRRLIEELETDAKQLDIKIDKNYEWGL
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCE
LANIDITCLKVLILYKEANLQKSLIDSKFNPEQLGSKEPKNINFDQLKTVQKFLKAKTSS
EECCHHHHHHHHHHHHHCCHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
LPDSRNYIFNTDHTDVRISGFRERASLALCIPFGTSPDKAIALVNQFKQKIRARILDKLD
CCCCCCEEEECCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
DIDDRSKSDEASKFFSAWDEPYKRIMIKNKGSILGLLAGLLCDHIFTFWKGEIPPGTKRK
CCCCCCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IDSVNDAVETTLDILKQHGFLYDAETVPKSRTAARRKIAAIPTILDI
HHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure
MMAKNTTQQNEVIDYFDAALLYVYANSWQSRQNDDVSKLRHLAQRVTEAIEHWPINLSDE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHH
LKSRSYYDVMDGLQARNRNKTTTPIYKDRIYWTATYPSDIKLSKLYAQRRDLLVDIFIKL
HHCCHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
NNLAYEIVEISEEKCEFWQIESSMRRYARFLAQKHDLPINYAMLANIVARHIYHANHADT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
YGMLDDPSEFLKKIDIYVKKSERDFEHFQRMLRCRRLIEELETDAKQLDIKIDKNYEWGL
CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCE
LANIDITCLKVLILYKEANLQKSLIDSKFNPEQLGSKEPKNINFDQLKTVQKFLKAKTSS
EECCHHHHHHHHHHHHHCCHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCC
LPDSRNYIFNTDHTDVRISGFRERASLALCIPFGTSPDKAIALVNQFKQKIRARILDKLD
CCCCCCEEEECCCCCEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
DIDDRSKSDEASKFFSAWDEPYKRIMIKNKGSILGLLAGLLCDHIFTFWKGEIPPGTKRK
CCCCCCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IDSVNDAVETTLDILKQHGFLYDAETVPKSRTAARRKIAAIPTILDI
HHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA