| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is hemK [H]
Identifier: 66048324
GI number: 66048324
Start: 6052034
End: 6052981
Strand: Direct
Name: hemK [H]
Synonym: Psyr_5100
Alternate gene names: 66048324
Gene position: 6052034-6052981 (Clockwise)
Preceding gene: 66048323
Following gene: 66048325
Centisome position: 99.32
GC content: 61.39
Gene sequence:
>948_bases ATGAGTCATCCCCTCCCCGACAGCGCCGCGCTGATTGCCCTGGCGCAGCGTCTTGAAACCAGCGGCTATCGCTTTATCAC GCCCACGCCCCTGACTCATCAACACGTCAATCAACGCCCGGAAAATCGTACTGCCGCGTCACTGCGCGATGTGTTCGGCT GGAGTCGGCTGATACCGGAGTCCATGCTGCCGGTCGAGGAGGCTCAAGGGTTGCTGGCTGCCGGTATTCTGGAACGTAAG GAAGACGGCTTGAAAAGCCGGGTGAGATTTTCCAGCCTGGATGATCTGCTGCTGGTGCATTCGGCGTTTCCTACCTCAGA TGAAGACTCGGTGTTTTTCGGTCCGGATACCTACCGCTTCGCGCAGTCCATCAATCGCCATCTGCAAGGTACGTCGCATC CGGTCAACCGCGCCGTCGACATCGGCTGTGGCACGGGTGCCGGCGCCATGTTGATCGCGGTCGCCCGTCCGCAGGCACAG GTCCACGCCGTCGACATCAACCCCAAGGCGCTGCATTTCGCACAGACCAATGCGGCAGTCGCCGGGCTGAAGAATATGGA GTGCTGCCACAGCGATATTCTTTCGGGCCTGAGCGGAAATTTCGACCTGATCGTCGCCAATCCGCCCTACATGAAAGACA CCCAGCGCCGCGCCTACCGCCACGGAGGTGATGCACTGGGCGCAGACCTGTCTGTGCGCATCCTGCGCGAGTCACTGGAC CGCCTCACTCCGGGCGGCTCGCTGGTGCTTTACACCGGCGTGGCCATGGTGGGCGAGCACGATCCGTTTTTCGAAGCGGT GCAGGCCGATATCGACCATGCGGCACTGACATGGACCTACCGCGAACTGGACCCGGATGTCTTCGGCGAAGAGCTGCTTG AAGAGGGTTACGAAGACGTGGACCGTATTGCAGCGGTGGAGCTGGTGGTCACCCGACGCCCCGCATGA
Upstream 100 bases:
>100_bases TCGAAAGCATGTCGCCGGCAAGACACGCGACCGCCGCCGGCCTGCACGCGACGCGTCTGTTTGTGAACAGCATGGCCGAG CGCATGACAGGAGCCCACGC
Downstream 100 bases:
>100_bases CCCACCGAAATATCTTCAATAGTTCGTGCTTATAACGCGCATAAGAACCAAGCATTGGTCAGCCTGACCGCATCCCGGTG AAACTTGCCACGAGCCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: M.EcoKHemKP; Protein-(glutamine-N(5)) MTase hemK; Protein-glutamine N-methyltransferase hemK [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSHPLPDSAALIALAQRLETSGYRFITPTPLTHQHVNQRPENRTAASLRDVFGWSRLIPESMLPVEEAQGLLAAGILERK EDGLKSRVRFSSLDDLLLVHSAFPTSDEDSVFFGPDTYRFAQSINRHLQGTSHPVNRAVDIGCGTGAGAMLIAVARPQAQ VHAVDINPKALHFAQTNAAVAGLKNMECCHSDILSGLSGNFDLIVANPPYMKDTQRRAYRHGGDALGADLSVRILRESLD RLTPGGSLVLYTGVAMVGEHDPFFEAVQADIDHAALTWTYRELDPDVFGEELLEEGYEDVDRIAAVELVVTRRPA
Sequences:
>Translated_315_residues MSHPLPDSAALIALAQRLETSGYRFITPTPLTHQHVNQRPENRTAASLRDVFGWSRLIPESMLPVEEAQGLLAAGILERK EDGLKSRVRFSSLDDLLLVHSAFPTSDEDSVFFGPDTYRFAQSINRHLQGTSHPVNRAVDIGCGTGAGAMLIAVARPQAQ VHAVDINPKALHFAQTNAAVAGLKNMECCHSDILSGLSGNFDLIVANPPYMKDTQRRAYRHGGDALGADLSVRILRESLD RLTPGGSLVLYTGVAMVGEHDPFFEAVQADIDHAALTWTYRELDPDVFGEELLEEGYEDVDRIAAVELVVTRRPA >Mature_314_residues SHPLPDSAALIALAQRLETSGYRFITPTPLTHQHVNQRPENRTAASLRDVFGWSRLIPESMLPVEEAQGLLAAGILERKE DGLKSRVRFSSLDDLLLVHSAFPTSDEDSVFFGPDTYRFAQSINRHLQGTSHPVNRAVDIGCGTGAGAMLIAVARPQAQV HAVDINPKALHFAQTNAAVAGLKNMECCHSDILSGLSGNFDLIVANPPYMKDTQRRAYRHGGDALGADLSVRILRESLDR LTPGGSLVLYTGVAMVGEHDPFFEAVQADIDHAALTWTYRELDPDVFGEELLEEGYEDVDRIAAVELVVTRRPA
Specific function: Methylates the translation termination release factor RF1/PrfA on 'Gln-235' and RF2/PrfB on 'Gln-252' [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Escherichia coli, GI1787463, Length=130, Percent_Identity=37.6923076923077, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 34430; Mature: 34299
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPLPDSAALIALAQRLETSGYRFITPTPLTHQHVNQRPENRTAASLRDVFGWSRLIPE CCCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCH SMLPVEEAQGLLAAGILERKEDGLKSRVRFSSLDDLLLVHSAFPTSDEDSVFFGPDTYRF HCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEECCCHHHH AQSINRHLQGTSHPVNRAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNAAV HHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCHHH AGLKNMECCHSDILSGLSGNFDLIVANPPYMKDTQRRAYRHGGDALGADLSVRILRESLD HCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH RLTPGGSLVLYTGVAMVGEHDPFFEAVQADIDHAALTWTYRELDPDVFGEELLEEGYEDV HCCCCCCEEEEECCHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHH DRIAAVELVVTRRPA HHHHHHHHEEECCCC >Mature Secondary Structure SHPLPDSAALIALAQRLETSGYRFITPTPLTHQHVNQRPENRTAASLRDVFGWSRLIPE CCCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCH SMLPVEEAQGLLAAGILERKEDGLKSRVRFSSLDDLLLVHSAFPTSDEDSVFFGPDTYRF HCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEECCCHHHH AQSINRHLQGTSHPVNRAVDIGCGTGAGAMLIAVARPQAQVHAVDINPKALHFAQTNAAV HHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEECCCHHH AGLKNMECCHSDILSGLSGNFDLIVANPPYMKDTQRRAYRHGGDALGADLSVRILRESLD HCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHH RLTPGGSLVLYTGVAMVGEHDPFFEAVQADIDHAALTWTYRELDPDVFGEELLEEGYEDV HCCCCCCEEEEECCHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHH DRIAAVELVVTRRPA HHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7883187; 7543480; 11805295; 8905232; 9278503 [H]