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The map label for this gene is yciF [H]

Identifier: 66048321

GI number: 66048321

Start: 6049167

End: 6049664

Strand: Direct

Name: yciF [H]

Synonym: Psyr_5097

Alternate gene names: 66048321

Gene position: 6049167-6049664 (Clockwise)

Preceding gene: 66048320

Following gene: 66048323

Centisome position: 99.27

GC content: 51.61

Gene sequence:

>498_bases
ATGACTCGCACGACGATAGAAGATTTGTTCATTCACGAACTTTCAGACGTTTACAGCGCTGAAAAGCAAATTACCAAAGC
ACTCCCGCGTCTGGCACGCGCTTCGACCAATCCACTGCTGGCAGAAGCCTTCAAGGCTCATCTTGAAGAAACTCAGGGTC
AGATCGATCGTATCGATGAATTGGTGGAAGGCGCTGGTCTGAAGCTGAAACGCATGAAGTGCGCGGCCATGGAAGGTCTG
ATCGAAGAAAGCAAGGAATTGCTGGAAGAGATCGAAAAAGGTGCAGTGCTCGATGCCGCGTTGATCGGCGCATGCCAGAA
GGTCGAACATTACGAGATCGCCAGTTACGGCACACTCATCGCAATGGCCAGACATTTAAATATGAAAGAGGCAGCCGCTC
TATTGAGTGCCACGTTGGCGGAAGAAAAAGGCGCAGACGAAAAGCTCACGGAGATCGCCGAACAGGGCGGAACCCAGGCG
GCCACTTCGAAAAAGTAA

Upstream 100 bases:

>100_bases
GGCGCTGATCTCACAGCGCATCAAACCCGACTTGTCCACAGGCCAGCAGGCAATCCGCTCGCCTGTGGACAAGTCTCTCT
TCGCTGAAAAGGGCAAGAAC

Downstream 100 bases:

>100_bases
TCATGGTTCACTGCGTCAGCCGCATGACGGTCTACAGGGTGTAGGTCCCGTCATGCGGGCCAGTGGAATTACTTCTTGGC
AGCATCACCGCCATGCGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTRTTIEDLFIHELSDVYSAEKQITKALPRLARASTNPLLAEAFKAHLEETQGQIDRIDELVEGAGLKLKRMKCAAMEGL
IEESKELLEEIEKGAVLDAALIGACQKVEHYEIASYGTLIAMARHLNMKEAAALLSATLAEEKGADEKLTEIAEQGGTQA
ATSKK

Sequences:

>Translated_165_residues
MTRTTIEDLFIHELSDVYSAEKQITKALPRLARASTNPLLAEAFKAHLEETQGQIDRIDELVEGAGLKLKRMKCAAMEGL
IEESKELLEEIEKGAVLDAALIGACQKVEHYEIASYGTLIAMARHLNMKEAAALLSATLAEEKGADEKLTEIAEQGGTQA
ATSKK
>Mature_164_residues
TRTTIEDLFIHELSDVYSAEKQITKALPRLARASTNPLLAEAFKAHLEETQGQIDRIDELVEGAGLKLKRMKCAAMEGLI
EESKELLEEIEKGAVLDAALIGACQKVEHYEIASYGTLIAMARHLNMKEAAALLSATLAEEKGADEKLTEIAEQGGTQAA
TSKK

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=165, Percent_Identity=60.6060606060606, Blast_Score=193, Evalue=5e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 17954; Mature: 17823

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTTIEDLFIHELSDVYSAEKQITKALPRLARASTNPLLAEAFKAHLEETQGQIDRIDE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVEGAGLKLKRMKCAAMEGLIEESKELLEEIEKGAVLDAALIGACQKVEHYEIASYGTLI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AMARHLNMKEAAALLSATLAEEKGADEKLTEIAEQGGTQAATSKK
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TRTTIEDLFIHELSDVYSAEKQITKALPRLARASTNPLLAEAFKAHLEETQGQIDRIDE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LVEGAGLKLKRMKCAAMEGLIEESKELLEEIEKGAVLDAALIGACQKVEHYEIASYGTLI
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AMARHLNMKEAAALLSATLAEEKGADEKLTEIAEQGGTQAATSKK
HHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]