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The map label for this gene is yciA [H]

Identifier: 66048267

GI number: 66048267

Start: 5985619

End: 5986020

Strand: Direct

Name: yciA [H]

Synonym: Psyr_5043

Alternate gene names: 66048267

Gene position: 5985619-5986020 (Clockwise)

Preceding gene: 66048258

Following gene: 66048268

Centisome position: 98.23

GC content: 62.19

Gene sequence:

>402_bases
ATGATCGAGCTCGAACAAGAAGACCCAACCCCGCAAGGCGACCTTGCACTGCAAATCACCGCCCTTCCCCGCGAAACCAA
TGGCTTTGGCGACATTTTTGGCGGCTGGCTGGTGTCCCAGATGGACCTGGCAGGCACAGCGATGGCCAGCAAAGTCGCGG
GTGGCCGTGTGGCGACCGTCGCCATCGATCGCATGGCGTTTCTTGTCCCGGTCGCAGTCGGCGAACAGCTTTCCTTCTAC
ACCCGCACCCTCGAAGTCGGACGCACCTCGATCAAGATGATGGTCGAAGTGTGGAGCGACGACCCGCTCACCAGCGAATG
GCGCAAGGTCACCGAGGCTGCGTTCGTGTTCGTGGCCATAGATGCCAGCGGCCGGACGCGCTCGGTTCCTGCGCGACGGT
AA

Upstream 100 bases:

>100_bases
ACCGGCGCTGAACACATAATGTTCATGCTCATGGTTTTGAATGGCACCTGTTAACCGCGACATACAATAATGAGAGTCAT
GGGTCAGAGGCACCCTAGGC

Downstream 100 bases:

>100_bases
ATTGTCGTTCGGTCATGGATTGGCTGCACGGGTAAACTCACCGAGCGTGAAGCGGTCTATTTTCGTCACGGTCATTGAGT
GAGAACTTTGCATGCCAACA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MIELEQEDPTPQGDLALQITALPRETNGFGDIFGGWLVSQMDLAGTAMASKVAGGRVATVAIDRMAFLVPVAVGEQLSFY
TRTLEVGRTSIKMMVEVWSDDPLTSEWRKVTEAAFVFVAIDASGRTRSVPARR

Sequences:

>Translated_133_residues
MIELEQEDPTPQGDLALQITALPRETNGFGDIFGGWLVSQMDLAGTAMASKVAGGRVATVAIDRMAFLVPVAVGEQLSFY
TRTLEVGRTSIKMMVEVWSDDPLTSEWRKVTEAAFVFVAIDASGRTRSVPARR
>Mature_133_residues
MIELEQEDPTPQGDLALQITALPRETNGFGDIFGGWLVSQMDLAGTAMASKVAGGRVATVAIDRMAFLVPVAVGEQLSFY
TRTLEVGRTSIKMMVEVWSDDPLTSEWRKVTEAAFVFVAIDASGRTRSVPARR

Specific function: Catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA [H]

COG id: COG1607

COG function: function code I; Acyl-CoA hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl coenzyme A hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI1787506, Length=124, Percent_Identity=46.7741935483871, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: 3.1.2.- [C]

Molecular weight: Translated: 14478; Mature: 14478

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELEQEDPTPQGDLALQITALPRETNGFGDIFGGWLVSQMDLAGTAMASKVAGGRVATV
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
AIDRMAFLVPVAVGEQLSFYTRTLEVGRTSIKMMVEVWSDDPLTSEWRKVTEAAFVFVAI
HHHHHHHHHHHHCCCCHHHHHHHHHHCHHEEEEEEEECCCCCCCHHHHHHHHEEEEEEEE
DASGRTRSVPARR
ECCCCCCCCCCCC
>Mature Secondary Structure
MIELEQEDPTPQGDLALQITALPRETNGFGDIFGGWLVSQMDLAGTAMASKVAGGRVATV
CCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
AIDRMAFLVPVAVGEQLSFYTRTLEVGRTSIKMMVEVWSDDPLTSEWRKVTEAAFVFVAI
HHHHHHHHHHHHCCCCHHHHHHHHHHCHHEEEEEEEECCCCCCCHHHHHHHHEEEEEEEE
DASGRTRSVPARR
ECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]