| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66048245
Identifier: 66048245
GI number: 66048245
Start: 5963106
End: 5963423
Strand: Direct
Name: 66048245
Synonym: Psyr_5021
Alternate gene names: NA
Gene position: 5963106-5963423 (Clockwise)
Preceding gene: 66048244
Following gene: 66048246
Centisome position: 97.86
GC content: 61.32
Gene sequence:
>318_bases ATGTCTCTGCTACGTAACCTTGGCGCTGTCTTTCTGTTGACCGCCGCAGCCGGTGCAAACGCCTCCAGCTTCATTGTCAC CACCGACGCAGTGGTCGATGCCGTCAATGCAGCGACGCGCGCGACCTCCAACGTGTCCTCTTCCCTGAAAGACGACAAGA TCGTTCTTGCCGCCCGTGACGACGCCGCCAGCTTCGTGGCCAGCTCCGGCGACATCCGCAGTGCTCGACTCGAAGGCGCG CTGCAGCATATCCGCCAGGTTCTGCCTGAACTGCAAGCCAGCGACAGCCAATTGGCTCAAGCCATCCTGGCCATCTGA
Upstream 100 bases:
>100_bases TCATGACAACTGCGGTATCGGTGGGATAGTCTAGCGCTCTACCTCAGCCCTTCGGCTTCGCAGGCAGTCTGTGCCCACTT GTCCACAACGGAACTCGATC
Downstream 100 bases:
>100_bases CCGCTGCGCCCCGGCCATGTGCCGGGGTAGCTCTGGCCGGCGCATTGCGCTAGCCTTGGAGGCTGTTTTGCCGGTTCGTG AAAGTCATGCGTTTAGTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSLLRNLGAVFLLTAAAGANASSFIVTTDAVVDAVNAATRATSNVSSSLKDDKIVLAARDDAASFVASSGDIRSARLEGA LQHIRQVLPELQASDSQLAQAILAI
Sequences:
>Translated_105_residues MSLLRNLGAVFLLTAAAGANASSFIVTTDAVVDAVNAATRATSNVSSSLKDDKIVLAARDDAASFVASSGDIRSARLEGA LQHIRQVLPELQASDSQLAQAILAI >Mature_104_residues SLLRNLGAVFLLTAAAGANASSFIVTTDAVVDAVNAATRATSNVSSSLKDDKIVLAARDDAASFVASSGDIRSARLEGAL QHIRQVLPELQASDSQLAQAILAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10766; Mature: 10635
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLRNLGAVFLLTAAAGANASSFIVTTDAVVDAVNAATRATSNVSSSLKDDKIVLAARD CCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC DAASFVASSGDIRSARLEGALQHIRQVLPELQASDSQLAQAILAI CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure SLLRNLGAVFLLTAAAGANASSFIVTTDAVVDAVNAATRATSNVSSSLKDDKIVLAARD CHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC DAASFVASSGDIRSARLEGALQHIRQVLPELQASDSQLAQAILAI CHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA