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The map label for this gene is 66048185

Identifier: 66048185

GI number: 66048185

Start: 5881461

End: 5882174

Strand: Direct

Name: 66048185

Synonym: Psyr_4961

Alternate gene names: NA

Gene position: 5881461-5882174 (Clockwise)

Preceding gene: 66048184

Following gene: 66048186

Centisome position: 96.52

GC content: 58.54

Gene sequence:

>714_bases
ATGACTGAAGCCGTGATGCAAGGTGCCGCTACGGCCGCAACCGAAAAACCTACGCTCAAAGACCTGGTGCGTGACTTCAT
CACCATGGCGCTGATTGTCCGTCGCGGCCGTCAGGCGATCTCGGTCACCGCCTTCGAATCCAGCGTCGATACTTTTTTCG
CCAACCTGGAGCGTCAGGCGCGCAGCGCCAACTACAGCGTCGAACAGGTCAAGGACGCCCAATACGCACTGTGCGCATTC
CTCGATGAGAGCGTGCTGCGTTCGGGCGACAACGACATGCGTCGCCACTTCGAAATGGAGCCGTTGCAGTTCCGTTATTT
CGGGGTTCACCTGGCGGGCGAAGGCTTCTTCGAGAAAATCGAACTGCTGCGCGCCGACGTGAAAAAGAACCTGGATGTGC
TCGAGGTGTATCACCTGTGCCTGGCCCTGGGTTTCGAAGGCAAATTCGGGCTGGGTCAGAAGGACCAGTTGCGCTACCTG
GCCAACACGCTGGGCCAGGACATCGCACGCTACCGCAAGACGCCAAAGGCGCTGTCGCCTGACTGGGCATTGCCTGACCA
GGTGTCGCAAATGCTGCGCCATGAAGTTCCGGTATGGCTTTACCTGGTGCTCATCGCCCTCGTATGCCTGGGTGTCTATC
TGACGCTTGACTGGTTGCTGGGCAAAGACGTGGCCGCGTTGGCCGAACAAATCAGCCAACTGTTCAATGCTTGA

Upstream 100 bases:

>100_bases
ATGGCCGCGTGTACGAACGCATGATGGAAGCCCAGGCCATTTCCTTCTACGCGCCCAGCGCGTTTACCAATCTCAAGCTC
GAACTGTTGGCGGTGCTTAA

Downstream 100 bases:

>100_bases
GTCCCGATCAGGTAACCGAGTCAGGAAGACATGAAGACATTACTGCGCCTGTTAAAAAGTTTCTGGTTCCTGGTCCCGAT
ACTGTGGCTGATCAGCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: OmpA Family Protein; Type IV/VI Secretion System Protein; OmpA/MotB Domain Protein; Secretion System Protein; Transmembrane Protein; Type IV / VI Secretion System Transmembrane Protein; Type VI Secretion System Core Protein; Type VI Secretion System Protein EvpN

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MTEAVMQGAATAATEKPTLKDLVRDFITMALIVRRGRQAISVTAFESSVDTFFANLERQARSANYSVEQVKDAQYALCAF
LDESVLRSGDNDMRRHFEMEPLQFRYFGVHLAGEGFFEKIELLRADVKKNLDVLEVYHLCLALGFEGKFGLGQKDQLRYL
ANTLGQDIARYRKTPKALSPDWALPDQVSQMLRHEVPVWLYLVLIALVCLGVYLTLDWLLGKDVAALAEQISQLFNA

Sequences:

>Translated_237_residues
MTEAVMQGAATAATEKPTLKDLVRDFITMALIVRRGRQAISVTAFESSVDTFFANLERQARSANYSVEQVKDAQYALCAF
LDESVLRSGDNDMRRHFEMEPLQFRYFGVHLAGEGFFEKIELLRADVKKNLDVLEVYHLCLALGFEGKFGLGQKDQLRYL
ANTLGQDIARYRKTPKALSPDWALPDQVSQMLRHEVPVWLYLVLIALVCLGVYLTLDWLLGKDVAALAEQISQLFNA
>Mature_236_residues
TEAVMQGAATAATEKPTLKDLVRDFITMALIVRRGRQAISVTAFESSVDTFFANLERQARSANYSVEQVKDAQYALCAFL
DESVLRSGDNDMRRHFEMEPLQFRYFGVHLAGEGFFEKIELLRADVKKNLDVLEVYHLCLALGFEGKFGLGQKDQLRYLA
NTLGQDIARYRKTPKALSPDWALPDQVSQMLRHEVPVWLYLVLIALVCLGVYLTLDWLLGKDVAALAEQISQLFNA

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26784; Mature: 26653

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAVMQGAATAATEKPTLKDLVRDFITMALIVRRGRQAISVTAFESSVDTFFANLERQA
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHH
RSANYSVEQVKDAQYALCAFLDESVLRSGDNDMRRHFEMEPLQFRYFGVHLAGEGFFEKI
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEEEECCCHHHHHH
ELLRADVKKNLDVLEVYHLCLALGFEGKFGLGQKDQLRYLANTLGQDIARYRKTPKALSP
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
DWALPDQVSQMLRHEVPVWLYLVLIALVCLGVYLTLDWLLGKDVAALAEQISQLFNA
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEAVMQGAATAATEKPTLKDLVRDFITMALIVRRGRQAISVTAFESSVDTFFANLERQA
CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHH
RSANYSVEQVKDAQYALCAFLDESVLRSGDNDMRRHFEMEPLQFRYFGVHLAGEGFFEKI
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEEEECCCHHHHHH
ELLRADVKKNLDVLEVYHLCLALGFEGKFGLGQKDQLRYLANTLGQDIARYRKTPKALSP
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
DWALPDQVSQMLRHEVPVWLYLVLIALVCLGVYLTLDWLLGKDVAALAEQISQLFNA
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA