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The map label for this gene is 66048184

Identifier: 66048184

GI number: 66048184

Start: 5880121

End: 5881464

Strand: Direct

Name: 66048184

Synonym: Psyr_4960

Alternate gene names: NA

Gene position: 5880121-5881464 (Clockwise)

Preceding gene: 66048183

Following gene: 66048185

Centisome position: 96.5

GC content: 60.27

Gene sequence:

>1344_bases
ATGAGTAAACAAAGCCGCGTGATGTGGTCGGAAGGCATGTTCCTTTTGCCGCAACATTTCCAATATCAGGATGAGTTTCA
TCAACATCAGCTTGCTGAGTCGACGCTGCGCTCCACGCCCTTTCACTGGGGCGTGCAAACGCTGGAAGTCGACGTCGAGG
CGCTGGCGACAGGCTCCCTGCAACTGAAGCGTCTGAAGCTGGTGTTCCCGGACGGCAGCCTTTACGACGCGCCGCAGCAC
GACCCGCTGCCCGCCGCCCGCGACCTGAAAAACCTGCTCAAAGGCGGAGAAATCAAGGTCTACGCGGCGCTCAAACTGCC
TGAGCCCTTTGGCCTGAATTACGTTGAAGACGGCCAGGAACAGAAGAGCGCGCGACGTTTTCGCAAACAGTTCGACACCC
TGCCGGACCTCAACGAAGGCGATCTGGAAAACGAAATCACCAGCCTGCGCCTGAACGTGGTGATGCTGGTCGATGGCGAC
AGTCTGGATGGCTACAGCTATTGCCCGATTGCCCGACTGGCACGCAACAGCATTGGCGGCTTCAACCTGGATGCGCATTT
TGTGCACCCGACGCTGCACGTGGGCACCCACGAGACGCTGGTCGGCCTCGGCAGACGTTTGATCAGCGTGCTGCAAGCCA
AGAGCAAGGCGCTTTCAGGCCGCCGCCGCGAGCGCGCTGACCAGATCGCCGAGTTCGGCTCCAGCGACGTCACCTTGTTC
TGGCTGCTGAATACCGTCAACCGCGCCTACCCGCAACTGGCTCACCTGCTGGCGCATCCACGCCTGCACCCGGAGCGCCT
GTATCTGTTTCTGGCGGAACTGGCGGGTGGTTTGCTGACCTTCTCGCTGGACACCCAGCTCACCGACATCCCCGATTACG
ATCATCAGGACCCGGCGGCCTCGTTGGTCAAGCTCGACGAACTGGTTCGTCTGCTGCTTGAAAACGTGATTCCGAACCAG
TGCATCGTCATCAACCTGAGTCAGGTCCGGCCTTCGTACTGGCAGGGCCAGTTGCTGGACCCGCGTCTTACCGAAGCCGA
CTTTTACATCTCGGTGCATGCCGACATGCCCGGCTCCAGCCTGCTGGAACTGGTGCCGCGCGCCTTCAAGGTCGGTTCGC
CGGAAGACATCGAAGTGGTGGTCAACAGCGCCATGCCGGGCGTCACGCTGAACCACTCGACGCGCCTGCCAAACGCCATT
CCGGTGCGCCTGGACAACCATTACTTCTCCATCGAGCCGCATGGCCGCGTGTACGAACGCATGATGGAAGCCCAGGCCAT
TTCCTTCTACGCGCCCAGCGCGTTTACCAATCTCAAGCTCGAACTGTTGGCGGTGCTTAAATGA

Upstream 100 bases:

>100_bases
GCGCGCAGGACGCAGCTGTCCAGCAGGTTCAGGACTCGGCCGGCAGTGCTGCCAAAAAGGCAGCTGACTCACAATTCAAT
TCTCTGTTGGAAGGCGCCAA

Downstream 100 bases:

>100_bases
CTGAAGCCGTGATGCAAGGTGCCGCTACGGCCGCAACCGAAAAACCTACGCTCAAAGACCTGGTGCGTGACTTCATCACC
ATGGCGCTGATTGTCCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Protein ImpJ/VasE; Conserved Protein; Replication/Virulence Associated Protein; Type VI Secretion System Protein EvpM; Protein ImpJ; Type VI Secretion System Protein; Type VI Secretion System Protein ImpJ; Type VI Secretion; Type VI Secretion System Core Protein; T6ss M; Type VI Secretion Protein VasE; Temperature-Dependent Protein Secretion ImpJ

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAESTLRSTPFHWGVQTLEVDVEALATGSLQLKRLKLVFPDGSLYDAPQH
DPLPAARDLKNLLKGGEIKVYAALKLPEPFGLNYVEDGQEQKSARRFRKQFDTLPDLNEGDLENEITSLRLNVVMLVDGD
SLDGYSYCPIARLARNSIGGFNLDAHFVHPTLHVGTHETLVGLGRRLISVLQAKSKALSGRRRERADQIAEFGSSDVTLF
WLLNTVNRAYPQLAHLLAHPRLHPERLYLFLAELAGGLLTFSLDTQLTDIPDYDHQDPAASLVKLDELVRLLLENVIPNQ
CIVINLSQVRPSYWQGQLLDPRLTEADFYISVHADMPGSSLLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHSTRLPNAI
PVRLDNHYFSIEPHGRVYERMMEAQAISFYAPSAFTNLKLELLAVLK

Sequences:

>Translated_447_residues
MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAESTLRSTPFHWGVQTLEVDVEALATGSLQLKRLKLVFPDGSLYDAPQH
DPLPAARDLKNLLKGGEIKVYAALKLPEPFGLNYVEDGQEQKSARRFRKQFDTLPDLNEGDLENEITSLRLNVVMLVDGD
SLDGYSYCPIARLARNSIGGFNLDAHFVHPTLHVGTHETLVGLGRRLISVLQAKSKALSGRRRERADQIAEFGSSDVTLF
WLLNTVNRAYPQLAHLLAHPRLHPERLYLFLAELAGGLLTFSLDTQLTDIPDYDHQDPAASLVKLDELVRLLLENVIPNQ
CIVINLSQVRPSYWQGQLLDPRLTEADFYISVHADMPGSSLLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHSTRLPNAI
PVRLDNHYFSIEPHGRVYERMMEAQAISFYAPSAFTNLKLELLAVLK
>Mature_446_residues
SKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAESTLRSTPFHWGVQTLEVDVEALATGSLQLKRLKLVFPDGSLYDAPQHD
PLPAARDLKNLLKGGEIKVYAALKLPEPFGLNYVEDGQEQKSARRFRKQFDTLPDLNEGDLENEITSLRLNVVMLVDGDS
LDGYSYCPIARLARNSIGGFNLDAHFVHPTLHVGTHETLVGLGRRLISVLQAKSKALSGRRRERADQIAEFGSSDVTLFW
LLNTVNRAYPQLAHLLAHPRLHPERLYLFLAELAGGLLTFSLDTQLTDIPDYDHQDPAASLVKLDELVRLLLENVIPNQC
IVINLSQVRPSYWQGQLLDPRLTEADFYISVHADMPGSSLLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHSTRLPNAIP
VRLDNHYFSIEPHGRVYERMMEAQAISFYAPSAFTNLKLELLAVLK

Specific function: Unknown

COG id: COG3522

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50328; Mature: 50197

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAESTLRSTPFHWGVQTLEVDVEALATGSL
CCCCCCEEECCCEEECCHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCE
QLKRLKLVFPDGSLYDAPQHDPLPAARDLKNLLKGGEIKVYAALKLPEPFGLNYVEDGQE
EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHCCHH
QKSARRFRKQFDTLPDLNEGDLENEITSLRLNVVMLVDGDSLDGYSYCPIARLARNSIGG
HHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCC
FNLDAHFVHPTLHVGTHETLVGLGRRLISVLQAKSKALSGRRRERADQIAEFGSSDVTLF
CCCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEE
WLLNTVNRAYPQLAHLLAHPRLHPERLYLFLAELAGGLLTFSLDTQLTDIPDYDHQDPAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHH
SLVKLDELVRLLLENVIPNQCIVINLSQVRPSYWQGQLLDPRLTEADFYISVHADMPGSS
HHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH
LLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHSTRLPNAIPVRLDNHYFSIEPHGRVYER
HHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEECCEEEEECCCHHHHHH
MMEAQAISFYAPSAFTNLKLELLAVLK
HHHHHHHEEECCCCCCCHHEEEEEECC
>Mature Secondary Structure 
SKQSRVMWSEGMFLLPQHFQYQDEFHQHQLAESTLRSTPFHWGVQTLEVDVEALATGSL
CCCCCEEECCCEEECCHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCCE
QLKRLKLVFPDGSLYDAPQHDPLPAARDLKNLLKGGEIKVYAALKLPEPFGLNYVEDGQE
EEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHCCHH
QKSARRFRKQFDTLPDLNEGDLENEITSLRLNVVMLVDGDSLDGYSYCPIARLARNSIGG
HHHHHHHHHHHCCCCCCCCCCHHHHHHEEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCC
FNLDAHFVHPTLHVGTHETLVGLGRRLISVLQAKSKALSGRRRERADQIAEFGSSDVTLF
CCCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEE
WLLNTVNRAYPQLAHLLAHPRLHPERLYLFLAELAGGLLTFSLDTQLTDIPDYDHQDPAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHH
SLVKLDELVRLLLENVIPNQCIVINLSQVRPSYWQGQLLDPRLTEADFYISVHADMPGSS
HHHHHHHHHHHHHHHCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH
LLELVPRAFKVGSPEDIEVVVNSAMPGVTLNHSTRLPNAIPVRLDNHYFSIEPHGRVYER
HHHHHHHHHCCCCCCCCCEEEECCCCCEEECCCCCCCCCEEEEECCEEEEECCCHHHHHH
MMEAQAISFYAPSAFTNLKLELLAVLK
HHHHHHHEEECCCCCCCHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA