| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yiiD [C]
Identifier: 66048163
GI number: 66048163
Start: 5855334
End: 5855807
Strand: Direct
Name: yiiD [C]
Synonym: Psyr_4939
Alternate gene names: 66048163
Gene position: 5855334-5855807 (Clockwise)
Preceding gene: 66048162
Following gene: 66048166
Centisome position: 96.09
GC content: 64.35
Gene sequence:
>474_bases ATGATACCGATTGAGCCTGGACATGACGCAGCCCGCGAGTTGGAACAGGTGCTGCACCACGACATCCCGCTGACCCGCGA GATGGGCATGCGCGTGCTCGACTGGCACAACCAGACCCTGCGCCTGCACTTGCCGCTAGCCCCCAACGTCAACCACAAGA GCACGCTGTTCGGCGGCAGCCTGTATTGCGGCGCAGTACTGGCGGGCTGGGGCTGGCTGCACCTGCGGCTGCGCGAAGCC GGGATCACCGACGGGCATATCGTGATTCAGGATGGACAGATCAGTTATCCACTGCCGGTACGCAGCGACGCCATCGCCCG CTGCGACGCGCCCGAGCTGGCGCAATGGGACAAATTCATCACCACCTACCAACGCCGAGGCCGCGCCCGCCTGACCCTGC ACACCGCCATCAGCGAGCAGGACAGTGAAGAACAGGCCGTGCGCTTTGTCGGGCAGTTTGTGTTGCACCGGTGA
Upstream 100 bases:
>100_bases GTGCGCAGCCTCGCGGAAGCGCTGGGTGTGCCGCGTAAGACCCTGCACGACAAACTGCGCAAGCACGGCCTGACGTTTGG CGACAGCAGTGGAGCCTCCG
Downstream 100 bases:
>100_bases GGCTGCGCGCAGTCAATTCACTACCCGTGGGAGCCAACTTGCTCGCGAAGAGGCCAGTGTAATCCGCAAAAATTCATCGT CTGATCAATCGTATTCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase Domain Protein; Acetyltransferase; Thioesterase; Acetyltransferase GNAT Family; Acetyltransferase Domain-Containing Protein; Histone Acetyltransferase HPA2-Like Acetyltransferase; WecD Protein; Acyltransferase
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MIPIEPGHDAARELEQVLHHDIPLTREMGMRVLDWHNQTLRLHLPLAPNVNHKSTLFGGSLYCGAVLAGWGWLHLRLREA GITDGHIVIQDGQISYPLPVRSDAIARCDAPELAQWDKFITTYQRRGRARLTLHTAISEQDSEEQAVRFVGQFVLHR
Sequences:
>Translated_157_residues MIPIEPGHDAARELEQVLHHDIPLTREMGMRVLDWHNQTLRLHLPLAPNVNHKSTLFGGSLYCGAVLAGWGWLHLRLREA GITDGHIVIQDGQISYPLPVRSDAIARCDAPELAQWDKFITTYQRRGRARLTLHTAISEQDSEEQAVRFVGQFVLHR >Mature_157_residues MIPIEPGHDAARELEQVLHHDIPLTREMGMRVLDWHNQTLRLHLPLAPNVNHKSTLFGGSLYCGAVLAGWGWLHLRLREA GITDGHIVIQDGQISYPLPVRSDAIARCDAPELAQWDKFITTYQRRGRARLTLHTAISEQDSEEQAVRFVGQFVLHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790321, Length=106, Percent_Identity=34.9056603773585, Blast_Score=63, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17840; Mature: 17840
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPIEPGHDAARELEQVLHHDIPLTREMGMRVLDWHNQTLRLHLPLAPNVNHKSTLFGGS CCCCCCCCHHHHHHHHHHHCCCCCCHHHCCEEEECCCCEEEEEECCCCCCCCCCEECCCH LYCGAVLAGWGWLHLRLREAGITDGHIVIQDGQISYPLPVRSDAIARCDAPELAQWDKFI HHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHH TTYQRRGRARLTLHTAISEQDSEEQAVRFVGQFVLHR HHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MIPIEPGHDAARELEQVLHHDIPLTREMGMRVLDWHNQTLRLHLPLAPNVNHKSTLFGGS CCCCCCCCHHHHHHHHHHHCCCCCCHHHCCEEEECCCCEEEEEECCCCCCCCCCEECCCH LYCGAVLAGWGWLHLRLREAGITDGHIVIQDGQISYPLPVRSDAIARCDAPELAQWDKFI HHHHHHHHCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCHHHHHHHH TTYQRRGRARLTLHTAISEQDSEEQAVRFVGQFVLHR HHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA