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The map label for this gene is yeaW [H]

Identifier: 66048000

GI number: 66048000

Start: 5654080

End: 5655378

Strand: Direct

Name: yeaW [H]

Synonym: Psyr_4776

Alternate gene names: 66048000

Gene position: 5654080-5655378 (Clockwise)

Preceding gene: 66047998

Following gene: 66048001

Centisome position: 92.79

GC content: 59.05

Gene sequence:

>1299_bases
ATGGACGTCACCGCAACCTTGAGCCTGGGCGATCCGCTGGAACCTGCACGCAAGGCCACTGCCGAGATGCTGCAGAATCG
CGAGCGCACGTACTCGCTGCCGCAGCCTTTCTACAGTGATGAGCGACTGTTTGAAATCGACATGCAGGAAATCTTTCACA
AGGAGTGGCTGATTGCCGGGATGACGTGCGAAATCCCGACCAAGGGCAATTACCTGACGCTGCAGATCGGCAAGAACCCG
ATCCTGGTCGTGCGCGGCCCGGACGGTGCCGTCAACGCGTTCCACAATGTGTGCCGCCATCGCGGCTCGCGCCTGTGCAC
AGCCGAAAAAGGCAAGGTCGCCAAACTGGTTTGCCACTATCACCAGTGGACGTATGAGCTGGACGGTCGCCTGCTGTATG
CGGGCACTGAAATGGGCGACGACTTCGACATGAAGCAGTTCGGCCTCAAACCGGTCCACGTCAAGACTGCGGGCGGCTAC
ATTTTCATCAGCCTGGCAGAAAACCCGCCGGCCATCGACGAGTTCCTCTCGACGCTGCGCCACTACATGGAACCCTATGA
CATGGAAAACACCAAGGTGGCGGTGCAAACCACCTTGATGGAGAAGGCCAACTGGAAGCTGGTGCTGGAAAACAACCGCG
AGTGCTACCACTGCAGTGGCTCGCACCCGGAATTGCTCAAGACGCTGCTGGAATGGGACGACGTCACCGATCCCCGCGCC
GATCAGACCTTCAAGGATCATGTCGCCGCGTCCGCCGCTGCCTGGGACGCAGAGAAAATTCCCTACGCCCACGCCAGCTT
CGGCTTGCGCAACCGTATCGTGCGCATGCCACTGCTTAAAGGCACAGTGTCGATGACCATGGACGGCAAGGTCGGCTGCA
AGAAACTGATGGGTCGTATCCAGAACCCTGACCTGGGCTCGATGCGCATTCTGCATTTGCCGCACTCCTGGAACCACTGC
ATGGGCGATCACATCATCGTCTTCACGGTGTGGCCGATCAGCGCGCAGGAAACCATGGTCACCACCAAGTGGATTGTCCA
CAAGGATGCGGTCGAAGGCGTCGATTACGACGTCGAGCGTATGCGCCAGGTCTGGGACGCTACCAATGATCAGGACCGTC
GTCTGGCCGAGGAAAACCAGCGAGGCATCAACTCCAGCGCCTATCAACCCGGCCCTTACTCGAAAACCTATGAGTTCGGC
GTGGTCAACTTCGTCGACTGGTACAGCTCGCGCATGCTGGAAAACCTCGGCGCGGAGCCTGCACCGTATTTGAAGGGCGT
GGCGGTCAATCACGAGTAG

Upstream 100 bases:

>100_bases
AGCATGATCGACTGATCTATCCTCATGCTTGAAACGCGATCACACCCGTATCAGCCACATTCGCAGGCCGCCCATGCCGC
GGTCATGAGGGATTTAATCG

Downstream 100 bases:

>100_bases
CGTTTACCCCGCCAACGCGATACGTCAGGGCTGACTCACTTCACGCACGAAGCGAGTCAGCCCTGAAGTATCGCCGACAC
AAAAGCCTTCCCGCCGATAC

Product: Rieske [2Fe-2S] region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MDVTATLSLGDPLEPARKATAEMLQNRERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNP
ILVVRGPDGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMGDDFDMKQFGLKPVHVKTAGGY
IFISLAENPPAIDEFLSTLRHYMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRA
DQTFKDHVAASAAAWDAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKVGCKKLMGRIQNPDLGSMRILHLPHSWNHC
MGDHIIVFTVWPISAQETMVTTKWIVHKDAVEGVDYDVERMRQVWDATNDQDRRLAEENQRGINSSAYQPGPYSKTYEFG
VVNFVDWYSSRMLENLGAEPAPYLKGVAVNHE

Sequences:

>Translated_432_residues
MDVTATLSLGDPLEPARKATAEMLQNRERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNP
ILVVRGPDGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMGDDFDMKQFGLKPVHVKTAGGY
IFISLAENPPAIDEFLSTLRHYMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRA
DQTFKDHVAASAAAWDAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKVGCKKLMGRIQNPDLGSMRILHLPHSWNHC
MGDHIIVFTVWPISAQETMVTTKWIVHKDAVEGVDYDVERMRQVWDATNDQDRRLAEENQRGINSSAYQPGPYSKTYEFG
VVNFVDWYSSRMLENLGAEPAPYLKGVAVNHE
>Mature_432_residues
MDVTATLSLGDPLEPARKATAEMLQNRERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAGMTCEIPTKGNYLTLQIGKNP
ILVVRGPDGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHYHQWTYELDGRLLYAGTEMGDDFDMKQFGLKPVHVKTAGGY
IFISLAENPPAIDEFLSTLRHYMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRA
DQTFKDHVAASAAAWDAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKVGCKKLMGRIQNPDLGSMRILHLPHSWNHC
MGDHIIVFTVWPISAQETMVTTKWIVHKDAVEGVDYDVERMRQVWDATNDQDRRLAEENQRGINSSAYQPGPYSKTYEFG
VVNFVDWYSSRMLENLGAEPAPYLKGVAVNHE

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=214, Percent_Identity=31.7757009345794, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI1788888, Length=212, Percent_Identity=26.8867924528302, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 49187; Mature: 49187

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVTATLSLGDPLEPARKATAEMLQNRERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAG
CCEEEEECCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEECHHHHHHHHHEEEC
MTCEIPTKGNYLTLQIGKNPILVVRGPDGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHY
EEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
HQWTYELDGRLLYAGTEMGDDFDMKQFGLKPVHVKTAGGYIFISLAENPPAIDEFLSTLR
HHEEEEECCEEEEEECCCCCCCCHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHH
HYMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRA
HHCCCCCCCCCEEEEEEEEHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCC
DQTFKDHVAASAAAWDAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKVGCKKLMGRI
CCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHEECCCCCCEEEEEECCCHHHHHHHHCC
QNPDLGSMRILHLPHSWNHCMGDHIIVFTVWPISAQETMVTTKWIVHKDAVEGVDYDVER
CCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEHHHHCCCCCCHHH
MRQVWDATNDQDRRLAEENQRGINSSAYQPGPYSKTYEFGVVNFVDWYSSRMLENLGAEP
HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCC
APYLKGVAVNHE
CCHHCCEEECCC
>Mature Secondary Structure
MDVTATLSLGDPLEPARKATAEMLQNRERTYSLPQPFYSDERLFEIDMQEIFHKEWLIAG
CCEEEEECCCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEECHHHHHHHHHEEEC
MTCEIPTKGNYLTLQIGKNPILVVRGPDGAVNAFHNVCRHRGSRLCTAEKGKVAKLVCHY
EEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCCHHHHHHHH
HQWTYELDGRLLYAGTEMGDDFDMKQFGLKPVHVKTAGGYIFISLAENPPAIDEFLSTLR
HHEEEEECCEEEEEECCCCCCCCHHHHCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHH
HYMEPYDMENTKVAVQTTLMEKANWKLVLENNRECYHCSGSHPELLKTLLEWDDVTDPRA
HHCCCCCCCCCEEEEEEEEHHCCCCEEEEECCCCEEEECCCCHHHHHHHHHHCCCCCCCC
DQTFKDHVAASAAAWDAEKIPYAHASFGLRNRIVRMPLLKGTVSMTMDGKVGCKKLMGRI
CCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHEECCCCCCEEEEEECCCHHHHHHHHCC
QNPDLGSMRILHLPHSWNHCMGDHIIVFTVWPISAQETMVTTKWIVHKDAVEGVDYDVER
CCCCCCCEEEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEEEEEEHHHHCCCCCCHHH
MRQVWDATNDQDRRLAEENQRGINSSAYQPGPYSKTYEFGVVNFVDWYSSRMLENLGAEP
HHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCC
APYLKGVAVNHE
CCHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]