| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is dhfrIII [H]
Identifier: 66047961
GI number: 66047961
Start: 5616850
End: 5617362
Strand: Direct
Name: dhfrIII [H]
Synonym: Psyr_4737
Alternate gene names: 66047961
Gene position: 5616850-5617362 (Clockwise)
Preceding gene: 66047949
Following gene: 66047962
Centisome position: 92.17
GC content: 62.96
Gene sequence:
>513_bases ATGAAAACTCATCTCCCCCTCAGCCTGATTGCCGCCCTCGGTGAAAACCGAGTGATTGGCGTCGACAATTCCATGCCCTG GCATTTGCCGGGGGATTTCAAATACTTCAAGGCCACGACGCTCGGCAAGCCGATCATCATGGGCCGCAAGACCTGGGATT CGTTGGGCCGCCCGCTGCCCGGCCGCCTCAATCTGGTGGTCAGCCGCCAGACCGACCTGCAGCTTGAAGGCGCAGAAGTC TTCGCTTCGCTGGACGCCGCCGTCGTGCGGGCCGAGCAGTGGGCGCAGGAACAGGGTGTCGACGAGGTGATGCTGATCGG CGGCGCGCAGCTTTACGCGCAGGGCCTCCCTCAGGCAGATCGCCTGTACCTGACTCGCGTGGCGCTGAGCCCTGATGGCG ACGCGTGGTTTCCGGAGTTCGATACCGCGCAGTGGGCGCTGGTATCCAACACCGAAAACGCCGCGGTCGATGGCAAGCCT GCCTACAATTTCGAAGTCTGGGAACGCGTCTGA
Upstream 100 bases:
>100_bases CTTGATTGAATTCAGCGGTGAGCATAACCGCAGTCATGGGACTGAGCACGGCGCATGTCAGTTCATTCGCCTGCCCTGCG ACCTCTGATATCCTCGCGGC
Downstream 100 bases:
>100_bases TCAGCGGTTTTCGGCGCAACTGCAACCGCTGACGAAAAACTGCAACAAAAGTGTCGTTTTTGGTTTCACCGTCGCAAATA AAGGGGCAAACGGCGTCATT
Product: dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKTHLPLSLIAALGENRVIGVDNSMPWHLPGDFKYFKATTLGKPIIMGRKTWDSLGRPLPGRLNLVVSRQTDLQLEGAEV FASLDAAVVRAEQWAQEQGVDEVMLIGGAQLYAQGLPQADRLYLTRVALSPDGDAWFPEFDTAQWALVSNTENAAVDGKP AYNFEVWERV
Sequences:
>Translated_170_residues MKTHLPLSLIAALGENRVIGVDNSMPWHLPGDFKYFKATTLGKPIIMGRKTWDSLGRPLPGRLNLVVSRQTDLQLEGAEV FASLDAAVVRAEQWAQEQGVDEVMLIGGAQLYAQGLPQADRLYLTRVALSPDGDAWFPEFDTAQWALVSNTENAAVDGKP AYNFEVWERV >Mature_170_residues MKTHLPLSLIAALGENRVIGVDNSMPWHLPGDFKYFKATTLGKPIIMGRKTWDSLGRPLPGRLNLVVSRQTDLQLEGAEV FASLDAAVVRAEQWAQEQGVDEVMLIGGAQLYAQGLPQADRLYLTRVALSPDGDAWFPEFDTAQWALVSNTENAAVDGKP AYNFEVWERV
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=181, Percent_Identity=34.2541436464088, Blast_Score=92, Evalue=2e-19, Organism=Homo sapiens, GI28827793, Length=183, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=5e-16, Organism=Escherichia coli, GI1786233, Length=166, Percent_Identity=43.9759036144578, Blast_Score=139, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17505899, Length=176, Percent_Identity=29.5454545454545, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324810, Length=136, Percent_Identity=31.6176470588235, Blast_Score=68, Evalue=7e-13, Organism=Drosophila melanogaster, GI116008026, Length=149, Percent_Identity=32.2147651006711, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24647458, Length=149, Percent_Identity=32.2147651006711, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18796; Mature: 18796
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTHLPLSLIAALGENRVIGVDNSMPWHLPGDFKYFKATTLGKPIIMGRKTWDSLGRPLP CCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCEEECCCCHHHHCCCCC GRLNLVVSRQTDLQLEGAEVFASLDAAVVRAEQWAQEQGVDEVMLIGGAQLYAQGLPQAD CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCC RLYLTRVALSPDGDAWFPEFDTAQWALVSNTENAAVDGKPAYNFEVWERV EEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCEEEEECC >Mature Secondary Structure MKTHLPLSLIAALGENRVIGVDNSMPWHLPGDFKYFKATTLGKPIIMGRKTWDSLGRPLP CCCCCHHHHHHHCCCCCEEECCCCCCCCCCCCCEEEEEECCCCCEEECCCCHHHHCCCCC GRLNLVVSRQTDLQLEGAEVFASLDAAVVRAEQWAQEQGVDEVMLIGGAQLYAQGLPQAD CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCC RLYLTRVALSPDGDAWFPEFDTAQWALVSNTENAAVDGKPAYNFEVWERV EEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]