Click here to switch to the map view.

The map label for this gene is yuxL [H]

Identifier: 66047899

GI number: 66047899

Start: 5540498

End: 5542324

Strand: Direct

Name: yuxL [H]

Synonym: Psyr_4675

Alternate gene names: 66047899

Gene position: 5540498-5542324 (Clockwise)

Preceding gene: 66047898

Following gene: 66047903

Centisome position: 90.92

GC content: 63.0

Gene sequence:

>1827_bases
ATGACCGAAACTCACGACTCATCGCAAAATCCTCCTGACCGCCTGAGCGCCGCCCAGGCGGTCGCTGCAGGCGTCGACTT
CGCCGAACTGGATGTCAGCTCGGCGGGCCTGTTCTGGAACGAATACCGCCCCGAAGACGGCGCGAGCCGCATCTGGCACT
GGTACGCCAACAGCAAGCGCTGCCTGACGCCACAAGGTTTCAGCGTACGCAGTCGGGTGTATGAATACGGTGGTGGTTCG
TTCTGCCTCGCCGACGACGCCGTAGTCTTCGTCAACGAGCGCGACCAGCAACTGTATCGACAGGCCCTGGACGCCAGCGA
GCCGGTGGCGCTGACCGAGGGCGACAAGCGCTACGGCGGCGTGTTCTTCAGCGGCGGCCGGATTCTGGCCGTTGAAGAGG
ACCGCAACACGCATCGACTGGTGGCTATCGAGCTGGCTGACGGCAAGCGCCAGTTACTGGCCGAAGGCGCTGATTTTTAC
TCATCGCCAATTGTCAGTGCCGACGGCAGGCGCCTGGCCTGGATCGAATGGCAGCGCCCGCATCAGCCGTGGACCAGCAC
CCGTTTGATGTGTGCAACGAAACAGGACGACGGCAACTGGGCCGCTGCGCAGTGCATCGCAGGTGACGGTGCGCAAGAGT
CTCTGCAACAGCCGCGCTTCGATGCCCATGGGCGTCTGTATTGCCTGACTGATCGCGCGGGTTTCTGGCAGCCCTGGGGC
GAATCGCCTTCCGGGTTTGCGCCGCTTCCCGCCCGTCCGGCGGATCATGCTTCCGCGCCGTGGCAAATGGGCAGTTGCAC
CTGGCTGCCGATCAACGATGGTTACCTGGCGAGCTGGTTTGCAGACGGTTCAAGTGTTCTTGGGCTGTGTCAGGCCAGCG
GCAGCGTCGAGGATTTCAGCGCGGGTTACAGCCGCTTTCGCAGCCTCGCCATTGACGAAGAGTTCGTCTATTGCATCGCC
GCCTCGGCCATCAGCACCTCAGCGGTACTGGCCATTTCTCGCCACGACGCCAGTGTTCAGGTGCTTGCCGGAGGCGGGTC
GCCGCTGCCGGCCGATCAGATCAGCCGTCCTCAGACGTTGCGTTACCCCAGTGGCGGGGCCGAGGCTCATGGCTACTTCT
ATCCGGCCATGACCGGCGCAGAAAAACCGCCGCTGGTGGTGTTCATCCATGGCGGCCCGACCTCTGCGTGCTACCCGGTG
CTGGACCCGCGCATTCAGTACTGGACGCACCGCGGCTTCGCCGTCGCAGACCTCAATTATCGCGGCAGCAGCGGCTACGG
TCGCGTGTACCGGCAAGGCCTGCACCTCACCTGGGGCGTGGCGGACGTCGAAGATGCCTGTGCAGTCGTGAAACATCTGG
CCGAGCGCGGCTTGATCGACGAACGACAGGCTTTCATTCGCGGCGGCAGTGCCGGTGGCTACACCACGCTCTGCGCGTTG
GCCTTCCGCGACGTATTCCGCGCAGGGGCCAGCCTTTACGGCGTCAGCGACCCGGTAGCACTGGCCAGGGCGACGCATAA
ATTCGAGGGTGATTATCTGGACTGGCTGATCGGCGATCCCGACAAGGACATCGAGCGCTATCAGGCTCGTACGCCCCTGC
TGCACGCCGACAGCATCAAAGTGCCGGTGATTTTCTTTCAGGGCGAACTGGATGCCGTGGTGGTTCCGGAACAGACCCGG
TCCATGCTCAAGGCCTTGCAGGACAACGGTATCAAGACCGAAGCGCACTTCTATGCGGACGAGCATCATGGGTTCCGCAA
GGCAAACAACCTGGCAGATGCGCTGGAGAAGGAATGGCGTTTCTATCGGGATGTGCTGGATGCCTGA

Upstream 100 bases:

>100_bases
GACCCGGTGTGCAGCAAATCCTATCACCACGGGATTATCACTCAGGCTCGTGACGAGTCCGAAACCGCTACTCAAACCAT
TGAAGAGCTGGCCTTTCGCA

Downstream 100 bases:

>100_bases
TCAGGCCGTGTGATCGTTCCCGCGTCAGGGAACGATCAGCGTGTGCAGCGAGGTGTTACTTGCGCGAAACGATGATGTAG
ATCGCGTGGATGATGCCGGG

Product: peptidase S9, prolyl oligopeptidase active site region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 608; Mature: 607

Protein sequence:

>608_residues
MTETHDSSQNPPDRLSAAQAVAAGVDFAELDVSSAGLFWNEYRPEDGASRIWHWYANSKRCLTPQGFSVRSRVYEYGGGS
FCLADDAVVFVNERDQQLYRQALDASEPVALTEGDKRYGGVFFSGGRILAVEEDRNTHRLVAIELADGKRQLLAEGADFY
SSPIVSADGRRLAWIEWQRPHQPWTSTRLMCATKQDDGNWAAAQCIAGDGAQESLQQPRFDAHGRLYCLTDRAGFWQPWG
ESPSGFAPLPARPADHASAPWQMGSCTWLPINDGYLASWFADGSSVLGLCQASGSVEDFSAGYSRFRSLAIDEEFVYCIA
ASAISTSAVLAISRHDASVQVLAGGGSPLPADQISRPQTLRYPSGGAEAHGYFYPAMTGAEKPPLVVFIHGGPTSACYPV
LDPRIQYWTHRGFAVADLNYRGSSGYGRVYRQGLHLTWGVADVEDACAVVKHLAERGLIDERQAFIRGGSAGGYTTLCAL
AFRDVFRAGASLYGVSDPVALARATHKFEGDYLDWLIGDPDKDIERYQARTPLLHADSIKVPVIFFQGELDAVVVPEQTR
SMLKALQDNGIKTEAHFYADEHHGFRKANNLADALEKEWRFYRDVLDA

Sequences:

>Translated_608_residues
MTETHDSSQNPPDRLSAAQAVAAGVDFAELDVSSAGLFWNEYRPEDGASRIWHWYANSKRCLTPQGFSVRSRVYEYGGGS
FCLADDAVVFVNERDQQLYRQALDASEPVALTEGDKRYGGVFFSGGRILAVEEDRNTHRLVAIELADGKRQLLAEGADFY
SSPIVSADGRRLAWIEWQRPHQPWTSTRLMCATKQDDGNWAAAQCIAGDGAQESLQQPRFDAHGRLYCLTDRAGFWQPWG
ESPSGFAPLPARPADHASAPWQMGSCTWLPINDGYLASWFADGSSVLGLCQASGSVEDFSAGYSRFRSLAIDEEFVYCIA
ASAISTSAVLAISRHDASVQVLAGGGSPLPADQISRPQTLRYPSGGAEAHGYFYPAMTGAEKPPLVVFIHGGPTSACYPV
LDPRIQYWTHRGFAVADLNYRGSSGYGRVYRQGLHLTWGVADVEDACAVVKHLAERGLIDERQAFIRGGSAGGYTTLCAL
AFRDVFRAGASLYGVSDPVALARATHKFEGDYLDWLIGDPDKDIERYQARTPLLHADSIKVPVIFFQGELDAVVVPEQTR
SMLKALQDNGIKTEAHFYADEHHGFRKANNLADALEKEWRFYRDVLDA
>Mature_607_residues
TETHDSSQNPPDRLSAAQAVAAGVDFAELDVSSAGLFWNEYRPEDGASRIWHWYANSKRCLTPQGFSVRSRVYEYGGGSF
CLADDAVVFVNERDQQLYRQALDASEPVALTEGDKRYGGVFFSGGRILAVEEDRNTHRLVAIELADGKRQLLAEGADFYS
SPIVSADGRRLAWIEWQRPHQPWTSTRLMCATKQDDGNWAAAQCIAGDGAQESLQQPRFDAHGRLYCLTDRAGFWQPWGE
SPSGFAPLPARPADHASAPWQMGSCTWLPINDGYLASWFADGSSVLGLCQASGSVEDFSAGYSRFRSLAIDEEFVYCIAA
SAISTSAVLAISRHDASVQVLAGGGSPLPADQISRPQTLRYPSGGAEAHGYFYPAMTGAEKPPLVVFIHGGPTSACYPVL
DPRIQYWTHRGFAVADLNYRGSSGYGRVYRQGLHLTWGVADVEDACAVVKHLAERGLIDERQAFIRGGSAGGYTTLCALA
FRDVFRAGASLYGVSDPVALARATHKFEGDYLDWLIGDPDKDIERYQARTPLLHADSIKVPVIFFQGELDAVVVPEQTRS
MLKALQDNGIKTEAHFYADEHHGFRKANNLADALEKEWRFYRDVLDA

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI16933540, Length=217, Percent_Identity=28.110599078341, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI18765694, Length=218, Percent_Identity=25.2293577981651, Blast_Score=68, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17552908, Length=596, Percent_Identity=29.1946308724832, Blast_Score=253, Evalue=2e-67,
Organism=Caenorhabditis elegans, GI25144540, Length=221, Percent_Identity=29.8642533936652, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI25144537, Length=221, Percent_Identity=29.8642533936652, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI25144543, Length=129, Percent_Identity=31.0077519379845, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 66805; Mature: 66674

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETHDSSQNPPDRLSAAQAVAAGVDFAELDVSSAGLFWNEYRPEDGASRIWHWYANSKR
CCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCEECCCCCCCCCCCEEEEECCCCE
CLTPQGFSVRSRVYEYGGGSFCLADDAVVFVNERDQQLYRQALDASEPVALTEGDKRYGG
EECCCCCHHHHHHHHCCCCEEEEECCEEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCC
VFFSGGRILAVEEDRNTHRLVAIELADGKRQLLAEGADFYSSPIVSADGRRLAWIEWQRP
EEEECCEEEEEECCCCCEEEEEEEECCCHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCC
HQPWTSTRLMCATKQDDGNWAAAQCIAGDGAQESLQQPRFDAHGRLYCLTDRAGFWQPWG
CCCCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
ESPSGFAPLPARPADHASAPWQMGSCTWLPINDGYLASWFADGSSVLGLCQASGSVEDFS
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCHHHH
AGYSRFRSLAIDEEFVYCIAASAISTSAVLAISRHDASVQVLAGGGSPLPADQISRPQTL
HHHHHHHHHCCCCCEEEEEEHHHHCCEEEEEEEECCCEEEEEECCCCCCCHHHCCCCCEE
RYPSGGAEAHGYFYPAMTGAEKPPLVVFIHGGPTSACYPVLDPRIQYWTHRGFAVADLNY
ECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHEECCCEEEEEECC
RGSSGYGRVYRQGLHLTWGVADVEDACAVVKHLAERGLIDERQAFIRGGSAGGYTTLCAL
CCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH
AFRDVFRAGASLYGVSDPVALARATHKFEGDYLDWLIGDPDKDIERYQARTPLLHADSIK
HHHHHHHCCCCEECCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEECCCCE
VPVIFFQGELDAVVVPEQTRSMLKALQDNGIKTEAHFYADEHHGFRKANNLADALEKEWR
EEEEEEECCCCEEEECHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
FYRDVLDA
HHHHHHCC
>Mature Secondary Structure 
TETHDSSQNPPDRLSAAQAVAAGVDFAELDVSSAGLFWNEYRPEDGASRIWHWYANSKR
CCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCEECCCCCCCCCCCEEEEECCCCE
CLTPQGFSVRSRVYEYGGGSFCLADDAVVFVNERDQQLYRQALDASEPVALTEGDKRYGG
EECCCCCHHHHHHHHCCCCEEEEECCEEEEEECCHHHHHHHHCCCCCCEEECCCCCCCCC
VFFSGGRILAVEEDRNTHRLVAIELADGKRQLLAEGADFYSSPIVSADGRRLAWIEWQRP
EEEECCEEEEEECCCCCEEEEEEEECCCHHHHHHCCCHHHCCCCCCCCCCEEEEEEECCC
HQPWTSTRLMCATKQDDGNWAAAQCIAGDGAQESLQQPRFDAHGRLYCLTDRAGFWQPWG
CCCCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCCC
ESPSGFAPLPARPADHASAPWQMGSCTWLPINDGYLASWFADGSSVLGLCQASGSVEDFS
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCEEEEECCCCCCHHHH
AGYSRFRSLAIDEEFVYCIAASAISTSAVLAISRHDASVQVLAGGGSPLPADQISRPQTL
HHHHHHHHHCCCCCEEEEEEHHHHCCEEEEEEEECCCEEEEEECCCCCCCHHHCCCCCEE
RYPSGGAEAHGYFYPAMTGAEKPPLVVFIHGGPTSACYPVLDPRIQYWTHRGFAVADLNY
ECCCCCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHEECCCEEEEEECC
RGSSGYGRVYRQGLHLTWGVADVEDACAVVKHLAERGLIDERQAFIRGGSAGGYTTLCAL
CCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH
AFRDVFRAGASLYGVSDPVALARATHKFEGDYLDWLIGDPDKDIERYQARTPLLHADSIK
HHHHHHHCCCCEECCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHCCCCEECCCCE
VPVIFFQGELDAVVVPEQTRSMLKALQDNGIKTEAHFYADEHHGFRKANNLADALEKEWR
EEEEEEECCCCEEEECHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
FYRDVLDA
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]