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The map label for this gene is pqqD [H]

Identifier: 66047897

GI number: 66047897

Start: 5539089

End: 5539373

Strand: Direct

Name: pqqD [H]

Synonym: Psyr_4673

Alternate gene names: 66047897

Gene position: 5539089-5539373 (Clockwise)

Preceding gene: 66047896

Following gene: 66047898

Centisome position: 90.9

GC content: 53.33

Gene sequence:

>285_bases
ATGAAGCACGATCCGCAGTTCCGAGCGTTGACACCCAAATGGCATCAAGGCTATCGCTTTCAGTACGAGCCTGCGCAAAA
GGCGCATGTGGTGCTTTACCCTGAAGGCATGATCAAACTCAATGAAAGCGCGGCCCTGATTGGCGGGCTGATCGATGGCA
AGCGCACCATCGCCGCCATCATTGATGAGCTTCATCAGCAGTTCCCCAATGTTCCCGAACTGGGCATGGACGTCGACGAG
TTCATGGAAGGCGCCAAAAAGAAAAACTGGATCGATCTTGTCTGA

Upstream 100 bases:

>100_bases
TGTGGAGCATGCTCGATGCGATGTCCATGGCCTACGAGCTGAACCGCCCGCCGTATCACAGCGTCACAGACCAAAGGGTC
TGGCATAAGGGGATTACCCT

Downstream 100 bases:

>100_bases
CATAGCACCCGTCACCAACACCCCGTACATACCGCCCACTCCCGAGGTCGGGCTGCCGCTGTGGCTGCTCGCCGAGCTGA
CCTATCGCTGCCCGTTGCAA

Product: pyrroloquinoline quinone biosynthesis protein PqqD

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein D [H]

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MKHDPQFRALTPKWHQGYRFQYEPAQKAHVVLYPEGMIKLNESAALIGGLIDGKRTIAAIIDELHQQFPNVPELGMDVDE
FMEGAKKKNWIDLV

Sequences:

>Translated_94_residues
MKHDPQFRALTPKWHQGYRFQYEPAQKAHVVLYPEGMIKLNESAALIGGLIDGKRTIAAIIDELHQQFPNVPELGMDVDE
FMEGAKKKNWIDLV
>Mature_94_residues
MKHDPQFRALTPKWHQGYRFQYEPAQKAHVVLYPEGMIKLNESAALIGGLIDGKRTIAAIIDELHQQFPNVPELGMDVDE
FMEGAKKKNWIDLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqqD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008792
- InterPro:   IPR022479 [H]

Pfam domain/function: PF05402 PqqD [H]

EC number: NA

Molecular weight: Translated: 10775; Mature: 10775

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHDPQFRALTPKWHQGYRFQYEPAQKAHVVLYPEGMIKLNESAALIGGLIDGKRTIAAI
CCCCCCCEEECCCCCCCCEEEECCCCCCEEEECCCCCEEECCCCHHHHHHCCCHHHHHHH
IDELHQQFPNVPELGMDVDEFMEGAKKKNWIDLV
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKHDPQFRALTPKWHQGYRFQYEPAQKAHVVLYPEGMIKLNESAALIGGLIDGKRTIAAI
CCCCCCCEEECCCCCCCCEEEECCCCCCEEEECCCCCEEECCCCHHHHHHCCCHHHHHHH
IDELHQQFPNVPELGMDVDEFMEGAKKKNWIDLV
HHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA