| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is estA [H]
Identifier: 66047833
GI number: 66047833
Start: 5462253
End: 5464175
Strand: Direct
Name: estA [H]
Synonym: Psyr_4606
Alternate gene names: 66047833
Gene position: 5462253-5464175 (Clockwise)
Preceding gene: 66047832
Following gene: 66047834
Centisome position: 89.64
GC content: 61.78
Gene sequence:
>1923_bases ATGACCAAGACATCGAGGCGCTGGCCCTTCGCGGCCTGCCTGTTATCGCTTGCCTGCGGCACCGCTGCTGCCGCGCCCTA TTCGACCATGGTGGTGTTCGGCGACAGCCTGGCCGATGCCGGGCAGTTTCCCGACACCGCCGGGCCCAGGGGCTCTACGC TTCGGTTCACCAATCGGGTCGGCCCCACTTATCAGGACGGCAGTGGAGAGGTGTTCAATCTGAACTCGTCGACGCTGATC GGCAGGATGCTCGGTGTGCCGGCAGGAGATCTGGCGGCTTCCACGTCGCCGGTCAATGCTGCGCTGGGCGCACCCGATGG CAATAACTGGGCAGTCGGCGGCTATCGGACCGACCAGATTCTTGACTCGATCAACTCGCAATCCACCGTCGTCGACCCGA ACACCGGCACATTGCTGCGCAGCCGGACCGGTTATCTGCCCGCCAACGGTTTTCGCGCCGACCCCAACGCGCTTTATTAC CTGACCGGAGGCGGCAACGACTTCCTGCAGGGTCGTGTGTTGAGTGCCAGCAGCGCCGCGCAAGCTGCCAATCAGCTGGC TGACAGCGCGCAAGCCCTGCAACAGGCCGGTGCGCGCTACATCATGGTCTGGTTGCTGCCGGATATCGGTAAAACGCCAG CCTTGAGCGGTTCGCCACTGGCTTCGGCAACTTCCGCACTCAGCGCGGGCTTCAATCAGCAGTTAGTCAGCCGACTGGCG CAGATCAATGCCCAGATCATTCCGCTGAATGTTCCATTGCTGATCAATGAAGTCCTCGCCGAACCGGCACGCTTCGGGTT CGATCCCAACGAGAATCTGGTCAGTACCTGTTTCAGCGGCAATAGCTGCCGGGAAAGCACCACCAACGGCCGGTCCAGTG CGACGCCGAATCCGAACCGGCTGTTCTTCAACGATCGCGTGCATCCGACCGAGGCCGGGCAGAGGTTGCTGGCCGACTAC GCCTACTCGCTGCTTTCGGCCCCCTGGGAAATCTCCCTGCTGCCGGAAATGGCCAATGGCACGCTGCGCATGCATCAGGA CGAGATCCGCGCCCAGTGGCTCAGCGACTGGGGCAACTGGCAAGGCATAGGACAGTGGCAGAGCATGCTTTCGGCAGGCG GTCAGAAAATGGACTTCGACGCGCAGGACAGTTCGGCTGATGCTGACGGAAGAGGCTATAACCTGACCATCGGCGGCAGC TACCGATTTGCCGAAAACTGGCGCACTGGGGTTGTCGCCGGGGCGTATCGCCAGAGTCTCGAGGCAGGGCCAAGGGATTC GGACTACAAACTCAACAGCTACATCGCCACTGCGTTCCTGCAGTATCAGGCCAACCACTGGTGGGGTGATCTGGCGGTGT CGGGCGGCAAACTGGACTACGAAAATGCCGAGCGCAAGTTCGCGCTGGGCGTCAGCGAAGGTCAGGAAAAAGGCGATACC GACGGCGAAATGTGGGCTGTCAGCGGGCGGGTCGGTTTCGACATCGCGGGCCCGACCAGTCGCTGGCATCTGTCGCCTTT CGTCAGCGCCGATTACGCGCACATCAATGTCGACGGCTACTCGGAAAAAGGCGACCGCTCGACCGCGCTGACCTTCAGTG ACCAGACGCGCAAATCGCGGCGTGCAGGCGTGGGTGTGCAGGGCAAATTCCAGGTGACACCGAGCACACAGGTATGGGGC GAAGTGGCCCATGAAAGGGAGTTCGAGACCGATCAGCAGGACGTGACCATGGCGCTCAACAGCGTTCAGTCGGTCGGTTT CACGCTGCAAGGCTACACACCGCAACGCGACCTGAACCGGGCCACGCTGGGCGTCAGCCAGAAGCTGACTCAGGACCTGA CACTGCGCGGCAATTACAACTGGCGCAAGAACGACGACGTGACCCAGCAAGGGGTGAATGTCGCGTTGAGTCTGAGTTTC TAG
Upstream 100 bases:
>100_bases AAAAAGCACCGCCGCAGCGCGATAATGTTCATCGAACTTTGCAGTCATGAAAAATCTTGCTACGTTTCCGGTACAAAACA AAAACAATCGGGATCCGTTC
Downstream 100 bases:
>100_bases ACTGCCCGCAGGAGGGAGCGTGAGGAACGATAATCTGACTATCGTGCCCATGCTCCGCGTGGGCATGCCGTTCTGGACGC TTCGCGTCCTGTCCTGAGAA
Product: Outer membrane autotransporter barrel
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MTKTSRRWPFAACLLSLACGTAAAAPYSTMVVFGDSLADAGQFPDTAGPRGSTLRFTNRVGPTYQDGSGEVFNLNSSTLI GRMLGVPAGDLAASTSPVNAALGAPDGNNWAVGGYRTDQILDSINSQSTVVDPNTGTLLRSRTGYLPANGFRADPNALYY LTGGGNDFLQGRVLSASSAAQAANQLADSAQALQQAGARYIMVWLLPDIGKTPALSGSPLASATSALSAGFNQQLVSRLA QINAQIIPLNVPLLINEVLAEPARFGFDPNENLVSTCFSGNSCRESTTNGRSSATPNPNRLFFNDRVHPTEAGQRLLADY AYSLLSAPWEISLLPEMANGTLRMHQDEIRAQWLSDWGNWQGIGQWQSMLSAGGQKMDFDAQDSSADADGRGYNLTIGGS YRFAENWRTGVVAGAYRQSLEAGPRDSDYKLNSYIATAFLQYQANHWWGDLAVSGGKLDYENAERKFALGVSEGQEKGDT DGEMWAVSGRVGFDIAGPTSRWHLSPFVSADYAHINVDGYSEKGDRSTALTFSDQTRKSRRAGVGVQGKFQVTPSTQVWG EVAHEREFETDQQDVTMALNSVQSVGFTLQGYTPQRDLNRATLGVSQKLTQDLTLRGNYNWRKNDDVTQQGVNVALSLSF
Sequences:
>Translated_640_residues MTKTSRRWPFAACLLSLACGTAAAAPYSTMVVFGDSLADAGQFPDTAGPRGSTLRFTNRVGPTYQDGSGEVFNLNSSTLI GRMLGVPAGDLAASTSPVNAALGAPDGNNWAVGGYRTDQILDSINSQSTVVDPNTGTLLRSRTGYLPANGFRADPNALYY LTGGGNDFLQGRVLSASSAAQAANQLADSAQALQQAGARYIMVWLLPDIGKTPALSGSPLASATSALSAGFNQQLVSRLA QINAQIIPLNVPLLINEVLAEPARFGFDPNENLVSTCFSGNSCRESTTNGRSSATPNPNRLFFNDRVHPTEAGQRLLADY AYSLLSAPWEISLLPEMANGTLRMHQDEIRAQWLSDWGNWQGIGQWQSMLSAGGQKMDFDAQDSSADADGRGYNLTIGGS YRFAENWRTGVVAGAYRQSLEAGPRDSDYKLNSYIATAFLQYQANHWWGDLAVSGGKLDYENAERKFALGVSEGQEKGDT DGEMWAVSGRVGFDIAGPTSRWHLSPFVSADYAHINVDGYSEKGDRSTALTFSDQTRKSRRAGVGVQGKFQVTPSTQVWG EVAHEREFETDQQDVTMALNSVQSVGFTLQGYTPQRDLNRATLGVSQKLTQDLTLRGNYNWRKNDDVTQQGVNVALSLSF >Mature_639_residues TKTSRRWPFAACLLSLACGTAAAAPYSTMVVFGDSLADAGQFPDTAGPRGSTLRFTNRVGPTYQDGSGEVFNLNSSTLIG RMLGVPAGDLAASTSPVNAALGAPDGNNWAVGGYRTDQILDSINSQSTVVDPNTGTLLRSRTGYLPANGFRADPNALYYL TGGGNDFLQGRVLSASSAAQAANQLADSAQALQQAGARYIMVWLLPDIGKTPALSGSPLASATSALSAGFNQQLVSRLAQ INAQIIPLNVPLLINEVLAEPARFGFDPNENLVSTCFSGNSCRESTTNGRSSATPNPNRLFFNDRVHPTEAGQRLLADYA YSLLSAPWEISLLPEMANGTLRMHQDEIRAQWLSDWGNWQGIGQWQSMLSAGGQKMDFDAQDSSADADGRGYNLTIGGSY RFAENWRTGVVAGAYRQSLEAGPRDSDYKLNSYIATAFLQYQANHWWGDLAVSGGKLDYENAERKFALGVSEGQEKGDTD GEMWAVSGRVGFDIAGPTSRWHLSPFVSADYAHINVDGYSEKGDRSTALTFSDQTRKSRRAGVGVQGKFQVTPSTQVWGE VAHEREFETDQQDVTMALNSVQSVGFTLQGYTPQRDLNRATLGVSQKLTQDLTLRGNYNWRKNDDVTQQGVNVALSLSF
Specific function: Unknown
COG id: COG3240
COG function: function code IR; Phospholipase/lecithinase/hemolysin
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013830 - InterPro: IPR013831 - InterPro: IPR017186 - InterPro: IPR001087 - InterPro: IPR008265 - InterPro: IPR006315 [H]
Pfam domain/function: PF03797 Autotransporter; PF00657 Lipase_GDSL [H]
EC number: =3.1.1.1 [H]
Molecular weight: Translated: 68974; Mature: 68843
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01098 LIPASE_GDSL_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTSRRWPFAACLLSLACGTAAAAPYSTMVVFGDSLADAGQFPDTAGPRGSTLRFTNRV CCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCEEEEECCC GPTYQDGSGEVFNLNSSTLIGRMLGVPAGDLAASTSPVNAALGAPDGNNWAVGGYRTDQI CCCEECCCCCEEECCCHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCCEEECCEEHHHH LDSINSQSTVVDPNTGTLLRSRTGYLPANGFRADPNALYYLTGGGNDFLQGRVLSASSAA HHHCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHCCEEECCHHHH QAANQLADSAQALQQAGARYIMVWLLPDIGKTPALSGSPLASATSALSAGFNQQLVSRLA HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH QINAQIIPLNVPLLINEVLAEPARFGFDPNENLVSTCFSGNSCRESTTNGRSSATPNPNR HCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE LFFNDRVHPTEAGQRLLADYAYSLLSAPWEISLLPEMANGTLRMHQDEIRAQWLSDWGNW EEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHCCCCEEEECHHHHHHHHHHHCCCC QGIGQWQSMLSAGGQKMDFDAQDSSADADGRGYNLTIGGSYRFAENWRTGVVAGAYRQSL CCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCEEEHHHHHHH EAGPRDSDYKLNSYIATAFLQYQANHWWGDLAVSGGKLDYENAERKFALGVSEGQEKGDT HCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCC DGEMWAVSGRVGFDIAGPTSRWHLSPFVSADYAHINVDGYSEKGDRSTALTFSDQTRKSR CCCEEEEECCEEEEECCCCCCEECCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHH RAGVGVQGKFQVTPSTQVWGEVAHEREFETDQQDVTMALNSVQSVGFTLQGYTPQRDLNR HCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHCCH ATLGVSQKLTQDLTLRGNYNWRKNDDVTQQGVNVALSLSF HHHCHHHHHHHCEEEECCCCCCCCCCHHHCCCCEEEEECC >Mature Secondary Structure TKTSRRWPFAACLLSLACGTAAAAPYSTMVVFGDSLADAGQFPDTAGPRGSTLRFTNRV CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCCEEEEECCC GPTYQDGSGEVFNLNSSTLIGRMLGVPAGDLAASTSPVNAALGAPDGNNWAVGGYRTDQI CCCEECCCCCEEECCCHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCCEEECCEEHHHH LDSINSQSTVVDPNTGTLLRSRTGYLPANGFRADPNALYYLTGGGNDFLQGRVLSASSAA HHHCCCCCEEECCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHCCEEECCHHHH QAANQLADSAQALQQAGARYIMVWLLPDIGKTPALSGSPLASATSALSAGFNQQLVSRLA HHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHH QINAQIIPLNVPLLINEVLAEPARFGFDPNENLVSTCFSGNSCRESTTNGRSSATPNPNR HCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCE LFFNDRVHPTEAGQRLLADYAYSLLSAPWEISLLPEMANGTLRMHQDEIRAQWLSDWGNW EEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECHHCCCCEEEECHHHHHHHHHHHCCCC QGIGQWQSMLSAGGQKMDFDAQDSSADADGRGYNLTIGGSYRFAENWRTGVVAGAYRQSL CCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCEEEHHHHHHH EAGPRDSDYKLNSYIATAFLQYQANHWWGDLAVSGGKLDYENAERKFALGVSEGQEKGDT HCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCC DGEMWAVSGRVGFDIAGPTSRWHLSPFVSADYAHINVDGYSEKGDRSTALTFSDQTRKSR CCCEEEEECCEEEEECCCCCCEECCCCCCCCEEEEEECCCCCCCCCCEEEEECHHHHHHH RAGVGVQGKFQVTPSTQVWGEVAHEREFETDQQDVTMALNSVQSVGFTLQGYTPQRDLNR HCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEECCCCCHHCCH ATLGVSQKLTQDLTLRGNYNWRKNDDVTQQGVNVALSLSF HHHCHHHHHHHCEEEECCCCCCCCCCHHHCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10559163; 10984043 [H]