Definition Pseudomonas syringae pv. syringae B728a, complete genome.
Accession NC_007005
Length 6,093,698

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The map label for this gene is bfr [H]

Identifier: 66047748

GI number: 66047748

Start: 5387554

End: 5388018

Strand: Reverse

Name: bfr [H]

Synonym: Psyr_4521

Alternate gene names: 66047748

Gene position: 5388018-5387554 (Counterclockwise)

Preceding gene: 66047749

Following gene: 66047746

Centisome position: 88.42

GC content: 55.91

Gene sequence:

>465_bases
ATGCAAGGCCACCCCGAAGTAATCGATTATCTCAACACGTTGCTCACGGGCGAACTGGCAGCTCGTGACCAATATTTCGT
TCACTCACGCATGTACGAAGACTGGGGCTTTTCGAAGCTCTACGAGCGTATCAATCATGAGATGGAAGAAGAGGCGCAAC
ACGCTGATGCGTTGATGCGTCGTATCCTGATGCTGGAAGGCACGCCGCGCATGCGCCCGGACGACCTCGACGTCGGCACC
ACAGTGCCTGAGATGCTCGCCAGCGATCTGCGTCTCGAATACAAGGTACGTACTGCCCTGTGCAAGGGTATCGAGCTCTG
TGAGCTGCACAGCGACTACGTGACCCGAGAAATCCTGCGCGTGCAGCTGGCTGATACCGAAGAAGACCATACCTACTGGC
TCGAACAGCAGATGGGGCTGATCAAGTCCATCGGCCTGCAGAACTACCTGCAATCGCAGTTCTGA

Upstream 100 bases:

>100_bases
GCGTAATTTCGCCACTTTTCGTCGGTTTATTGCGTTTTTCTAAGTGACCTCGCGCGGCGCTTGGTTCAAACTATCGTCTT
TGAAGCAGGAGTCTGGTGCG

Downstream 100 bases:

>100_bases
TTCGACCGCTCATAAAAAAGCTCCTGCACTTGCGTGACAGGAGCTTTTTTATATCCGGGTTCGACTGACGCCGAACCCGT
TTTCGTCACACTCGTCAGGC

Product: bacterioferritin

Products: NA

Alternate protein names: BFR [H]

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMRRILMLEGTPRMRPDDLDVGT
TVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILRVQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF

Sequences:

>Translated_154_residues
MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMRRILMLEGTPRMRPDDLDVGT
TVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILRVQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF
>Mature_154_residues
MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMRRILMLEGTPRMRPDDLDVGT
TVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILRVQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF

Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]

COG id: COG2193

COG function: function code P; Bacterioferritin (cytochrome b1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Escherichia coli, GI1789733, Length=155, Percent_Identity=43.2258064516129, Blast_Score=124, Evalue=2e-30,

Paralogues:

None

Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002024
- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 18112; Mature: 18112

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS50905 FERRITIN_LIKE ; PS00549 BACTERIOFERRITIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RILMLEGTPRMRPDDLDVGTTVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILR
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQGHPEVIDYLNTLLTGELAARDQYFVHSRMYEDWGFSKLYERINHEMEEEAQHADALMR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RILMLEGTPRMRPDDLDVGTTVPEMLASDLRLEYKVRTALCKGIELCELHSDYVTREILR
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VQLADTEEDHTYWLEQQMGLIKSIGLQNYLQSQF
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9358059 [H]