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The map label for this gene is 66047742

Identifier: 66047742

GI number: 66047742

Start: 5378999

End: 5380201

Strand: Reverse

Name: 66047742

Synonym: Psyr_4515

Alternate gene names: NA

Gene position: 5380201-5378999 (Counterclockwise)

Preceding gene: 66047744

Following gene: 66047741

Centisome position: 88.29

GC content: 46.3

Gene sequence:

>1203_bases
TTGACTCGCTTGCACTTAACGCGTATCAGCAACTGCAGAGGCGGCGCTCGGCCAGGCCCGATGACACGGACTGATTCTGA
AGACATGGATCGCTTGACTTCAATACTCATCGAAGATGCGACAATCGCAAGCTTACTCCGGCTTGAACATTACCTGGATA
TTCATCAGGGACACGAGCATGTTAGCTACGTCGACCACATAAGAATGCGAAGGCGAGAGAAGACGATCCAGGCCCAAGCA
TTCAAGCTCATTTACCTCGACACCAATGCGTGGAAATGTGCTGCTGACCGTAGGCAAGGCAAGGAGCTGAAGACGCCGGA
GATGGAGCGTTTTGCTGACGTCCTGGAACGGGCGGCATCATCAGGAGAGTTCGCATTTTTGATTGGCGCTCCTAATTTTT
TTGAGTTGGACTCAATGAATGATGCCTCCACGCGTAATTCCTTATGTGAGTTGGTTGACCAGCTATCTAAGGGGTTCTGC
ACGCTGCCCTATTCTGATCGAATGGGAACAGAAATCGTGCATTTAGAAAAAAACGAGCAAGATCATGTGCTTGAGATAGA
AGACTTTCTATGCAGCCCAGCTGAGCTATTGGGTATTCCTAACGTTGAGCTTCGAGAGCCTCTAATAGGGCTTGTTGATG
AAGGTACGCTCAACAAGGCTTACTATGATGCAGTCTCTGAGCTACCGTTTTCATTCCAGCTTCAGCTCGCCGGAAATGCT
CCTGGAGAGAAATGGAGAAATTCTAACGGTATTGAAGAACTGAACACTAACAAGGCCCTGCATCAACCTGAAATAGCGAA
TTTGATTTCTGGTATTTTTGTAGAGTTGAAAGGTTGTATCGAAGCATGGTGTCGGGAGAATAGTCTAACTGCTGATCCAG
CTATGGTTGTAATATTGGCTGGTCGCGCAATAATTCATTGGAAACAATATAAGAGTTCAACAAGTTTGTCGACTCTTAAG
ATTATTAGTGGGTTGCATGGTCTTATGAGGTTTGACAGTCATCGGAAATATAAATCTGGTGATATAGCTGACTATATGAT
TGCCGCGTCTGCATTACCTGTAGCATCGGCATTTTTCACGGATAGAAAGTTAGTGAATTATATAAGTGATCCCCGGATCC
GCCTTGACGGCATTTTCAGTTGTGACTTGGTTAGTGGTTTCGGGGAAATGGGCGACTATTTGGAAGTGCGGATGGCGACC
TAG

Upstream 100 bases:

>100_bases
CTTCGTGGAAAGGATCGTTGGTAGCCAGCATGTAAGAGCTCCATCAAATTTCGTAGCGGCAATGTGCCGCTCCAGATATA
TTTTTAGATGAAAACACAAA

Downstream 100 bases:

>100_bases
AGTATAGAGTAGTCTGCGGATATAATTTTTATGTCCACTATTTTTGATTTGGGCGCCAGCTAGCTTGAGTTTGTGTATGT
CTTCAGATTGAGTTGACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MTRLHLTRISNCRGGARPGPMTRTDSEDMDRLTSILIEDATIASLLRLEHYLDIHQGHEHVSYVDHIRMRRREKTIQAQA
FKLIYLDTNAWKCAADRRQGKELKTPEMERFADVLERAASSGEFAFLIGAPNFFELDSMNDASTRNSLCELVDQLSKGFC
TLPYSDRMGTEIVHLEKNEQDHVLEIEDFLCSPAELLGIPNVELREPLIGLVDEGTLNKAYYDAVSELPFSFQLQLAGNA
PGEKWRNSNGIEELNTNKALHQPEIANLISGIFVELKGCIEAWCRENSLTADPAMVVILAGRAIIHWKQYKSSTSLSTLK
IISGLHGLMRFDSHRKYKSGDIADYMIAASALPVASAFFTDRKLVNYISDPRIRLDGIFSCDLVSGFGEMGDYLEVRMAT

Sequences:

>Translated_400_residues
MTRLHLTRISNCRGGARPGPMTRTDSEDMDRLTSILIEDATIASLLRLEHYLDIHQGHEHVSYVDHIRMRRREKTIQAQA
FKLIYLDTNAWKCAADRRQGKELKTPEMERFADVLERAASSGEFAFLIGAPNFFELDSMNDASTRNSLCELVDQLSKGFC
TLPYSDRMGTEIVHLEKNEQDHVLEIEDFLCSPAELLGIPNVELREPLIGLVDEGTLNKAYYDAVSELPFSFQLQLAGNA
PGEKWRNSNGIEELNTNKALHQPEIANLISGIFVELKGCIEAWCRENSLTADPAMVVILAGRAIIHWKQYKSSTSLSTLK
IISGLHGLMRFDSHRKYKSGDIADYMIAASALPVASAFFTDRKLVNYISDPRIRLDGIFSCDLVSGFGEMGDYLEVRMAT
>Mature_399_residues
TRLHLTRISNCRGGARPGPMTRTDSEDMDRLTSILIEDATIASLLRLEHYLDIHQGHEHVSYVDHIRMRRREKTIQAQAF
KLIYLDTNAWKCAADRRQGKELKTPEMERFADVLERAASSGEFAFLIGAPNFFELDSMNDASTRNSLCELVDQLSKGFCT
LPYSDRMGTEIVHLEKNEQDHVLEIEDFLCSPAELLGIPNVELREPLIGLVDEGTLNKAYYDAVSELPFSFQLQLAGNAP
GEKWRNSNGIEELNTNKALHQPEIANLISGIFVELKGCIEAWCRENSLTADPAMVVILAGRAIIHWKQYKSSTSLSTLKI
ISGLHGLMRFDSHRKYKSGDIADYMIAASALPVASAFFTDRKLVNYISDPRIRLDGIFSCDLVSGFGEMGDYLEVRMAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44968; Mature: 44837

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLHLTRISNCRGGARPGPMTRTDSEDMDRLTSILIEDATIASLLRLEHYLDIHQGHEH
CCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VSYVDHIRMRRREKTIQAQAFKLIYLDTNAWKCAADRRQGKELKTPEMERFADVLERAAS
HHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEECHHHHCCCCCCCCHHHHHHHHHHHHCC
SGEFAFLIGAPNFFELDSMNDASTRNSLCELVDQLSKGFCTLPYSDRMGTEIVHLEKNEQ
CCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCC
DHVLEIEDFLCSPAELLGIPNVELREPLIGLVDEGTLNKAYYDAVSELPFSFQLQLAGNA
CCEEEHHHHHCCCHHHHCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCC
PGEKWRNSNGIEELNTNKALHQPEIANLISGIFVELKGCIEAWCRENSLTADPAMVVILA
CCHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
GRAIIHWKQYKSSTSLSTLKIISGLHGLMRFDSHRKYKSGDIADYMIAASALPVASAFFT
CCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DRKLVNYISDPRIRLDGIFSCDLVSGFGEMGDYLEVRMAT
HHHHHHHHCCCCEEECCEEEHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure 
TRLHLTRISNCRGGARPGPMTRTDSEDMDRLTSILIEDATIASLLRLEHYLDIHQGHEH
CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
VSYVDHIRMRRREKTIQAQAFKLIYLDTNAWKCAADRRQGKELKTPEMERFADVLERAAS
HHHHHHHHHHHHHHHHHEEEEEEEEEECCCEEECHHHHCCCCCCCCHHHHHHHHHHHHCC
SGEFAFLIGAPNFFELDSMNDASTRNSLCELVDQLSKGFCTLPYSDRMGTEIVHLEKNEQ
CCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCCEEEEEECCCC
DHVLEIEDFLCSPAELLGIPNVELREPLIGLVDEGTLNKAYYDAVSELPFSFQLQLAGNA
CCEEEHHHHHCCCHHHHCCCCCHHHCCHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCC
PGEKWRNSNGIEELNTNKALHQPEIANLISGIFVELKGCIEAWCRENSLTADPAMVVILA
CCHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEC
GRAIIHWKQYKSSTSLSTLKIISGLHGLMRFDSHRKYKSGDIADYMIAASALPVASAFFT
CCCEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DRKLVNYISDPRIRLDGIFSCDLVSGFGEMGDYLEVRMAT
HHHHHHHHCCCCEEECCEEEHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA