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The map label for this gene is 66047698

Identifier: 66047698

GI number: 66047698

Start: 5331356

End: 5332621

Strand: Direct

Name: 66047698

Synonym: Psyr_4471

Alternate gene names: NA

Gene position: 5331356-5332621 (Clockwise)

Preceding gene: 66047697

Following gene: 66047699

Centisome position: 87.49

GC content: 60.74

Gene sequence:

>1266_bases
ATGTATCTGTTTCGTCTGGCCATGGCCAGCCTGGCCAACCGCCGTTTCACTGCATTCCTCACTGCCTTCGCCATTGCGCT
GTCGGTTTGCCTGTTACTGGCCGTCGAACGGGTGCGCACCGAAGCGCGCTCCAGTTTCGCCAGCACCATCAGCGGCACCG
ACCTGATCGTCGGTGCACGCTCGGGCTCGATCAACCTGTTGCTGTACTCGGTGTTCCGCATCGGCAATGCCACCAACAAC
ATTCGCTGGGACAGCTTCGAGCATTTCGCCAACAGCAAACAGGTCAAGTGGGCGATCCCGGTTTCGCTGGGCGACTCCCA
TCGTGGCTATCGGGTGATGGGCACCAATGAGGCGTATTTCGAGCATTACCAGTTCGGTCGCCAGCAGCACCTGGAAATGG
CCGAAGGACGCGAGTTCAAGACCGACCCGTTTGAAGTGGTGCTGGGTTCGGAGGTCGCCAAGGCGCTGCATTACAAGCTG
GGCGACAAGCTGGTGCTGGCGCACGGTGTAGCGGCGATCAGCCTGGTCAAGCATGACGACAAACCGTTCACCGTGGTTGG
CATCCTCAAGCCGACCGGTACGCCGGTGGACCGCACGCTGCATATCAGCCTGGGCGGCATGGAAGCCATTCATATCGACT
GGCACAACGGTGCCCCGGCACGCGGCAGCGAGCGCATTTCAGCCGATCAGGCGCGCAATATGGACCTGACGCCGACTGCG
ATCACCGCGTTCATGCTGGGCTTGAACAGCAAGATTTCCACCTTCAGCCTGCAACGCGAGATCAACGAATACCGTGGCGA
ACCCATGCTGGCGATTCTGCCCGGCGTGGCACTGCAGGAGCTGTGGAGCCTGATGGGCACGGCGGAAAAGGCGCTGTTCG
TGATTTCGCTGTTCGTGGTGCTGACCGGGCTGATCGGCATGCTGACCGCGATTCTCACCAGCCTCAATGAACGGCGCCGG
GAAATGGCCATCCTGCGCTCGGTCGGCGCGCGCCCCTGGCATATCGCGAGCCTGCTTATACTCGAAGCCTTCGCCCTGGC
GCTGGCAGGTGTCATCAGCGGCCTTGCGCTGCTCTATATCGGCATCTTCGTGGCCCGCGACTACGTGCTCGACAACTACG
GTCTGTACCTGTCGTCTATGCCACCTGGCCAATATGAATGGACATTACTCGGTGCCATTCTCGGCTGCGCGCTGTTGATG
GGAACCGTGCCAGCCTGGCGAGCCTACAGGCAGTCACTGGCCGATGGACTGTCGATTCGTTTATGA

Upstream 100 bases:

>100_bases
CTGCTGTTTGTCAGTCATGACCAGAGCCTGGCACCGCTGTTTGATCGCAATCTGTCGCTGAGCGACCTGAATCGCGCCGC
CGTCGCCGTGGAGATTTGAG

Downstream 100 bases:

>100_bases
GGACCTTCATGATGCGGCGCATGCTACTCACTCTGCTGTTCTCGGTTACCACTCAAGTGTGGGCCGCCGAGCCGCGTGAG
CTGACCTGGAATGACATGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptide ABC Transporter Permease; Efflux ABC Transporter Permease Protein; ABC Efflux Transporter Permease Protein; ABC Transporter Permease; ABC-Type Transport System Permease Component; Peptide ABC Transporter Permease Component; Transmembrane Protein; ABC Transporter Membrane Protein; Permease Component Protein; ABC Transporter Permease Protein; ABC Transport System Permease Protein; Antimicrobial Peptide ABC Transporter Permease; ABC Transporter Transmembrane Permease; ABC-Type Transport System Permease

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MYLFRLAMASLANRRFTAFLTAFAIALSVCLLLAVERVRTEARSSFASTISGTDLIVGARSGSINLLLYSVFRIGNATNN
IRWDSFEHFANSKQVKWAIPVSLGDSHRGYRVMGTNEAYFEHYQFGRQQHLEMAEGREFKTDPFEVVLGSEVAKALHYKL
GDKLVLAHGVAAISLVKHDDKPFTVVGILKPTGTPVDRTLHISLGGMEAIHIDWHNGAPARGSERISADQARNMDLTPTA
ITAFMLGLNSKISTFSLQREINEYRGEPMLAILPGVALQELWSLMGTAEKALFVISLFVVLTGLIGMLTAILTSLNERRR
EMAILRSVGARPWHIASLLILEAFALALAGVISGLALLYIGIFVARDYVLDNYGLYLSSMPPGQYEWTLLGAILGCALLM
GTVPAWRAYRQSLADGLSIRL

Sequences:

>Translated_421_residues
MYLFRLAMASLANRRFTAFLTAFAIALSVCLLLAVERVRTEARSSFASTISGTDLIVGARSGSINLLLYSVFRIGNATNN
IRWDSFEHFANSKQVKWAIPVSLGDSHRGYRVMGTNEAYFEHYQFGRQQHLEMAEGREFKTDPFEVVLGSEVAKALHYKL
GDKLVLAHGVAAISLVKHDDKPFTVVGILKPTGTPVDRTLHISLGGMEAIHIDWHNGAPARGSERISADQARNMDLTPTA
ITAFMLGLNSKISTFSLQREINEYRGEPMLAILPGVALQELWSLMGTAEKALFVISLFVVLTGLIGMLTAILTSLNERRR
EMAILRSVGARPWHIASLLILEAFALALAGVISGLALLYIGIFVARDYVLDNYGLYLSSMPPGQYEWTLLGAILGCALLM
GTVPAWRAYRQSLADGLSIRL
>Mature_421_residues
MYLFRLAMASLANRRFTAFLTAFAIALSVCLLLAVERVRTEARSSFASTISGTDLIVGARSGSINLLLYSVFRIGNATNN
IRWDSFEHFANSKQVKWAIPVSLGDSHRGYRVMGTNEAYFEHYQFGRQQHLEMAEGREFKTDPFEVVLGSEVAKALHYKL
GDKLVLAHGVAAISLVKHDDKPFTVVGILKPTGTPVDRTLHISLGGMEAIHIDWHNGAPARGSERISADQARNMDLTPTA
ITAFMLGLNSKISTFSLQREINEYRGEPMLAILPGVALQELWSLMGTAEKALFVISLFVVLTGLIGMLTAILTSLNERRR
EMAILRSVGARPWHIASLLILEAFALALAGVISGLALLYIGIFVARDYVLDNYGLYLSSMPPGQYEWTLLGAILGCALLM
GTVPAWRAYRQSLADGLSIRL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46292; Mature: 46292

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLFRLAMASLANRRFTAFLTAFAIALSVCLLLAVERVRTEARSSFASTISGTDLIVGAR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SGSINLLLYSVFRIGNATNNIRWDSFEHFANSKQVKWAIPVSLGDSHRGYRVMGTNEAYF
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCCEEEECCCHHHH
EHYQFGRQQHLEMAEGREFKTDPFEVVLGSEVAKALHYKLGDKLVLAHGVAAISLVKHDD
HHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHHHCCCEEEEHHHHHHHHEEECCC
KPFTVVGILKPTGTPVDRTLHISLGGMEAIHIDWHNGAPARGSERISADQARNMDLTPTA
CCEEEEEEECCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHH
ITAFMLGLNSKISTFSLQREINEYRGEPMLAILPGVALQELWSLMGTAEKALFVISLFVV
HHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTGLIGMLTAILTSLNERRREMAILRSVGARPWHIASLLILEAFALALAGVISGLALLYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIFVARDYVLDNYGLYLSSMPPGQYEWTLLGAILGCALLMGTVPAWRAYRQSLADGLSIR
HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEC
L
C
>Mature Secondary Structure
MYLFRLAMASLANRRFTAFLTAFAIALSVCLLLAVERVRTEARSSFASTISGTDLIVGAR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC
SGSINLLLYSVFRIGNATNNIRWDSFEHFANSKQVKWAIPVSLGDSHRGYRVMGTNEAYF
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCEEEEEEEEECCCCCCEEEECCCHHHH
EHYQFGRQQHLEMAEGREFKTDPFEVVLGSEVAKALHYKLGDKLVLAHGVAAISLVKHDD
HHHHHHHHHHHHHHCCCCCCCCHHHEEHHHHHHHHHHHHCCCEEEEHHHHHHHHEEECCC
KPFTVVGILKPTGTPVDRTLHISLGGMEAIHIDWHNGAPARGSERISADQARNMDLTPTA
CCEEEEEEECCCCCCCCEEEEEEECCEEEEEEEECCCCCCCCCCCCCHHHHCCCCCCHHH
ITAFMLGLNSKISTFSLQREINEYRGEPMLAILPGVALQELWSLMGTAEKALFVISLFVV
HHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LTGLIGMLTAILTSLNERRREMAILRSVGARPWHIASLLILEAFALALAGVISGLALLYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIFVARDYVLDNYGLYLSSMPPGQYEWTLLGAILGCALLMGTVPAWRAYRQSLADGLSIR
HHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA