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The map label for this gene is hupE [H]

Identifier: 66047681

GI number: 66047681

Start: 5319082

End: 5319654

Strand: Direct

Name: hupE [H]

Synonym: Psyr_4454

Alternate gene names: 66047681

Gene position: 5319082-5319654 (Clockwise)

Preceding gene: 66047680

Following gene: 66047691

Centisome position: 87.29

GC content: 64.75

Gene sequence:

>573_bases
ATGAATTACAAAAAAGCCCTTGGCGCCCTCGCGCTGTTGCTGGTCCCGACTCTGGCGCTGGCTCACCCCGGTCATGGCGA
TAACGGCCTGATCGCCGGTATCAGCCACCCGATCGGCGGGCTGGATCATTTGCTGGCAATGCTTGCCGTCGGCTTGTGGG
CTGCGCAGCAACAAGGTTCGGCACGCTGGGCGCTGCCGTGCACCTTCGTCGGCACCATGCTGATCGGCGGCATGCTGGGC
TTTGAAGGTCTGAACCTGCCAGCGCTGGAAAGCGGCATTGCCGCATCGGTACTGGCTCTGGGCCTGGCCGTGGCATTGGC
AGTACGTCCGCCGCTGGCGCTGGCGGTAGCCGCAACAGCCCTGTTCGCCTTGTTCCACGGCGTGGCGCATGGCCTTGAAC
TGCCGGAAATGTCCAGCCCATGGGCCTACGCAGCAGGTTTCGTTGCAGCGACCGCGGCCTTGCATGCGCTGGGTTATGCA
GTGGTTCGCGTGTTGCCGCAGGCGGCAGCACCGCTGGTGCGTATCGCCGGTGCAGCTTCTGCGGCAGCGGGAGTATGGTT
GCTGGCAGCCTGA

Upstream 100 bases:

>100_bases
CAGAAAACCGGTCAGGGTCTGGAACAGATCATTGCCTTCATTGAGCGCCAGGGCCTGCTGACTGCGGCCGCCTGAATTCA
CAACCAAAAGGAACCCGTCG

Downstream 100 bases:

>100_bases
GGGAGTTTCGCGCTGCTCGTGTCCGCTTCAGCTGGGCATGATCAGCGTGAAAGCACAGGAATGCGGTACAGGTAGAGCAG
CACTGCGCTGGCAAACGCCA

Product: HupE/UreJ protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNYKKALGALALLLVPTLALAHPGHGDNGLIAGISHPIGGLDHLLAMLAVGLWAAQQQGSARWALPCTFVGTMLIGGMLG
FEGLNLPALESGIAASVLALGLAVALAVRPPLALAVAATALFALFHGVAHGLELPEMSSPWAYAAGFVAATAALHALGYA
VVRVLPQAAAPLVRIAGAASAAAGVWLLAA

Sequences:

>Translated_190_residues
MNYKKALGALALLLVPTLALAHPGHGDNGLIAGISHPIGGLDHLLAMLAVGLWAAQQQGSARWALPCTFVGTMLIGGMLG
FEGLNLPALESGIAASVLALGLAVALAVRPPLALAVAATALFALFHGVAHGLELPEMSSPWAYAAGFVAATAALHALGYA
VVRVLPQAAAPLVRIAGAASAAAGVWLLAA
>Mature_190_residues
MNYKKALGALALLLVPTLALAHPGHGDNGLIAGISHPIGGLDHLLAMLAVGLWAAQQQGSARWALPCTFVGTMLIGGMLG
FEGLNLPALESGIAASVLALGLAVALAVRPPLALAVAATALFALFHGVAHGLELPEMSSPWAYAAGFVAATAALHALGYA
VVRVLPQAAAPLVRIAGAASAAAGVWLLAA

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 18926; Mature: 18926

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYKKALGALALLLVPTLALAHPGHGDNGLIAGISHPIGGLDHLLAMLAVGLWAAQQQGS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
ARWALPCTFVGTMLIGGMLGFEGLNLPALESGIAASVLALGLAVALAVRPPLALAVAATA
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LFALFHGVAHGLELPEMSSPWAYAAGFVAATAALHALGYAVVRVLPQAAAPLVRIAGAAS
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAGVWLLAA
HHHCEEEECC
>Mature Secondary Structure
MNYKKALGALALLLVPTLALAHPGHGDNGLIAGISHPIGGLDHLLAMLAVGLWAAQQQGS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
ARWALPCTFVGTMLIGGMLGFEGLNLPALESGIAASVLALGLAVALAVRPPLALAVAATA
CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
LFALFHGVAHGLELPEMSSPWAYAAGFVAATAALHALGYAVVRVLPQAAAPLVRIAGAAS
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAGVWLLAA
HHHCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]