Click here to switch to the map view.

The map label for this gene is osmE [H]

Identifier: 66047673

GI number: 66047673

Start: 5312525

End: 5312863

Strand: Direct

Name: osmE [H]

Synonym: Psyr_4446

Alternate gene names: 66047673

Gene position: 5312525-5312863 (Clockwise)

Preceding gene: 66047671

Following gene: 66047674

Centisome position: 87.18

GC content: 55.46

Gene sequence:

>339_bases
ATGTACAAAAAACTCTTCGCGGCGACCTTTGTATTGGCGACGATGGCTGGCTGCAGCAACACAACCGTGCAGAACCCGGT
GGACTACGTCACTTATCGCAACGAGCCGCTGGTCAAGCAGGTCGAGAACGGCATGACGCGCCAGCAGGTCCTGACCATCG
GCGGTGAACCGTCGAGCACCATCGAGCGCAGGGTCAACCCGGGCACTTGCAACAACTACGTCATGAACAAGGACGGCCAC
AAACAGGTTTACCACGTCAGCTTCAACAGCGACGGGCGTGTGACCAACAAAGGTTTCATGACTTGCGAACAACGCGAGAA
GAACGAAAAAGCGATGTAA

Upstream 100 bases:

>100_bases
AGGTACTGCCTCATCGCCATCTTTTTTTCGAACTCTTGGACCCCTCCCGGCTCCAAGGCATACCGGGCCAAAACCGGCTC
TGACATGTGGAGCAACAACG

Downstream 100 bases:

>100_bases
TCAAAACGCAGGCACAAACAAAAAGCCCGAGGCATGAATGCCTCGGGCTTTTTGTTGAATGCTTTTTTAGGATCTGTACG
AAAAGTGGCTGCGCTCGGTG

Product: DNA-binding transcriptional activator OsmE

Products: NA

Alternate protein names: Activator of ntr-like gene protein [H]

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MYKKLFAATFVLATMAGCSNTTVQNPVDYVTYRNEPLVKQVENGMTRQQVLTIGGEPSSTIERRVNPGTCNNYVMNKDGH
KQVYHVSFNSDGRVTNKGFMTCEQREKNEKAM

Sequences:

>Translated_112_residues
MYKKLFAATFVLATMAGCSNTTVQNPVDYVTYRNEPLVKQVENGMTRQQVLTIGGEPSSTIERRVNPGTCNNYVMNKDGH
KQVYHVSFNSDGRVTNKGFMTCEQREKNEKAM
>Mature_112_residues
MYKKLFAATFVLATMAGCSNTTVQNPVDYVTYRNEPLVKQVENGMTRQQVLTIGGEPSSTIERRVNPGTCNNYVMNKDGH
KQVYHVSFNSDGRVTNKGFMTCEQREKNEKAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788035, Length=108, Percent_Identity=34.2592592592593, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007450 [H]

Pfam domain/function: PF04355 SmpA_OmlA [H]

EC number: NA

Molecular weight: Translated: 12646; Mature: 12646

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKLFAATFVLATMAGCSNTTVQNPVDYVTYRNEPLVKQVENGMTRQQVLTIGGEPSST
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCEEEEEECCCCCHH
IERRVNPGTCNNYVMNKDGHKQVYHVSFNSDGRVTNKGFMTCEQREKNEKAM
HHHCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYKKLFAATFVLATMAGCSNTTVQNPVDYVTYRNEPLVKQVENGMTRQQVLTIGGEPSST
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCEEEEEECCCCCHH
IERRVNPGTCNNYVMNKDGHKQVYHVSFNSDGRVTNKGFMTCEQREKNEKAM
HHHCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]