| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047672
Identifier: 66047672
GI number: 66047672
Start: 5311983
End: 5312216
Strand: Reverse
Name: 66047672
Synonym: Psyr_4445
Alternate gene names: NA
Gene position: 5312216-5311983 (Counterclockwise)
Preceding gene: 66047676
Following gene: 66047670
Centisome position: 87.18
GC content: 56.41
Gene sequence:
>234_bases ATGAGCGATAAAGAACTGTATGAGATCGAGTACACCCTGCTCGGCGAGCACCACGTAGACATTATCGAGAATCTGGACGT GCCTATCATTGAAGTGGTGCACGAACTGGCGCTCAAGCATCACGTAGAACTGGACGAGCTTCCAATGGGTGAAGCCGGCC TGCCGCTTGCCGCCGGCATCACCGACGTGTCGATTCACAGCCTGGAGGGCAGCGAAGGCAGCGCGACTGTCTAA
Upstream 100 bases:
>100_bases TGGCATGGTTGAGCGTTTTGCTCAGCCTTGGGCTCGGTCATCGGTTGTCGGACCGTAGTTCGTTAATCAGCCGCTCCTCT GTGACGGCCAGGAAGATGCG
Downstream 100 bases:
>100_bases TCCGCACCTGACCGCAGCGGCGTCGTCCAGCGTTCCGCGAGGATGACGCCGCACAGGGTCAGCGCTCCGCCGAACAGGTG ATAGAGCGCCAGTTGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MSDKELYEIEYTLLGEHHVDIIENLDVPIIEVVHELALKHHVELDELPMGEAGLPLAAGITDVSIHSLEGSEGSATV
Sequences:
>Translated_77_residues MSDKELYEIEYTLLGEHHVDIIENLDVPIIEVVHELALKHHVELDELPMGEAGLPLAAGITDVSIHSLEGSEGSATV >Mature_76_residues SDKELYEIEYTLLGEHHVDIIENLDVPIIEVVHELALKHHVELDELPMGEAGLPLAAGITDVSIHSLEGSEGSATV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8384; Mature: 8252
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKELYEIEYTLLGEHHVDIIENLDVPIIEVVHELALKHHVELDELPMGEAGLPLAAGI CCCCCEEEEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCC TDVSIHSLEGSEGSATV CCCEEEECCCCCCCCCC >Mature Secondary Structure SDKELYEIEYTLLGEHHVDIIENLDVPIIEVVHELALKHHVELDELPMGEAGLPLAAGI CCCCEEEEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCC TDVSIHSLEGSEGSATV CCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA