| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66047649
Identifier: 66047649
GI number: 66047649
Start: 5287258
End: 5287719
Strand: Direct
Name: 66047649
Synonym: Psyr_4422
Alternate gene names: NA
Gene position: 5287258-5287719 (Clockwise)
Preceding gene: 66047647
Following gene: 66047650
Centisome position: 86.77
GC content: 61.69
Gene sequence:
>462_bases ATGCTCAAACAAGCACTGCTGCTGGCCGCACTGCTGCTGCCAGCCTGCCTCGTCCACGCCCATGAGTACAAGGCAGGGCC ATTGCTGATCGGCCATCCGTGGTCAATGGAGCTACCGCCCAATGCACCAACCGTGGCGGCCTATTTCACCCTCGAGAACA AGGGTGACAGCGCCGACCGCTTGATCAGCGTCGACACGCCCATCGCCGGACAGGCGCAGTTGCATGAGCATGTACACGCC GACGGGCTGATGAAGATGCAGCACGTGCAGGCGGTCGACATACCGGCTGGCGCGAAGGTGGTTTTCGCACCCATGGCCTG GCACGTGATGCTGCTGGACATCAAGGACCGTTCGAAGCTGGTGGTCGGCCAGCGCTTCCCGATGACCCTGCATTTCGAAA AGGCGGGGGATGTCGAGGTGCAGGTCGTGGTACAAAAGCAGGCTTCGGAGCACCAGCACTGA
Upstream 100 bases:
>100_bases AACGGGCTCACTCAGCGGCGCTCAAAGGTTTGCCCAAGTGTTTCGGACTTCCAGTTGAGCTACCTTGCACTCCTTCATCG AATCCCCCGGAGAATCCCCC
Downstream 100 bases:
>100_bases GTAGCCTTCCCGAGTGAGCAGCGCACGCCGTCGCGACAGATCAGCCCCTCGTAATAACCGGGGAGCCTGGCTGAGTCTGT TTGCCATGTTGATGATCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MLKQALLLAALLLPACLVHAHEYKAGPLLIGHPWSMELPPNAPTVAAYFTLENKGDSADRLISVDTPIAGQAQLHEHVHA DGLMKMQHVQAVDIPAGAKVVFAPMAWHVMLLDIKDRSKLVVGQRFPMTLHFEKAGDVEVQVVVQKQASEHQH
Sequences:
>Translated_153_residues MLKQALLLAALLLPACLVHAHEYKAGPLLIGHPWSMELPPNAPTVAAYFTLENKGDSADRLISVDTPIAGQAQLHEHVHA DGLMKMQHVQAVDIPAGAKVVFAPMAWHVMLLDIKDRSKLVVGQRFPMTLHFEKAGDVEVQVVVQKQASEHQH >Mature_153_residues MLKQALLLAALLLPACLVHAHEYKAGPLLIGHPWSMELPPNAPTVAAYFTLENKGDSADRLISVDTPIAGQAQLHEHVHA DGLMKMQHVQAVDIPAGAKVVFAPMAWHVMLLDIKDRSKLVVGQRFPMTLHFEKAGDVEVQVVVQKQASEHQH
Specific function: Unknown
COG id: COG2847
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16783; Mature: 16783
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKQALLLAALLLPACLVHAHEYKAGPLLIGHPWSMELPPNAPTVAAYFTLENKGDSADR CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCE LISVDTPIAGQAQLHEHVHADGLMKMQHVQAVDIPAGAKVVFAPMAWHVMLLDIKDRSKL EEEECCCCCCHHHHHHHHCCCCCCEEHHEEEECCCCCCEEEEECCEEEEEEEEECCCCEE VVGQRFPMTLHFEKAGDVEVQVVVQKQASEHQH EECCCCCEEEEECCCCCEEEEEEEEECCCCCCC >Mature Secondary Structure MLKQALLLAALLLPACLVHAHEYKAGPLLIGHPWSMELPPNAPTVAAYFTLENKGDSADR CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCE LISVDTPIAGQAQLHEHVHADGLMKMQHVQAVDIPAGAKVVFAPMAWHVMLLDIKDRSKL EEEECCCCCCHHHHHHHHCCCCCCEEHHEEEECCCCCCEEEEECCEEEEEEEEECCCCEE VVGQRFPMTLHFEKAGDVEVQVVVQKQASEHQH EECCCCCEEEEECCCCCEEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA