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The map label for this gene is 66047638

Identifier: 66047638

GI number: 66047638

Start: 5275015

End: 5275650

Strand: Reverse

Name: 66047638

Synonym: Psyr_4411

Alternate gene names: NA

Gene position: 5275650-5275015 (Counterclockwise)

Preceding gene: 66047639

Following gene: 66047637

Centisome position: 86.58

GC content: 53.77

Gene sequence:

>636_bases
ATGTCTGATCCGAATGAAGCCCTGTTGACCGGTGCCAGCCTGCTGTCCTTCGCCGACAATGTCGAACCTGATTTGCGCCA
GGACATAATCGATTGTCTGCACCATGCCAAACTGGTCGCAGATGATCGCCATTCTTTCAGGGGAAACTGGCGTGCATGGC
TGGATGTTTACCAGCGCTCGATTGCCGCCACGGGCGGTTCGCATGGCGCCGGGATCAACGATGCGCGTTTGAAGATTCAC
AGTTTCAGTGACATTGGCAGCTTGCAGCTTCCAGTGTTCGATAATGCTGGCGAGCTTCGCCAGCTATATCGCAGTTCGCT
CGACAGGCTACTGAGCAGTGATCATGCGAAGACGTTTTTCAGCAGTTGGTTTACGTCCGGACGTTCTGAAAGCTTTCAAC
TCATACCGTGTTCAATGCACAGCGAAGACGAGGTAACGATCCTGTTGTGCAGCCTGCAGATGACGACCATAGCGTTGAGA
CCCGCGCTTTATTTTTGGCAGGTTCTTGGCGGAGAAATGCAGGTGCATGTCGTTGGTACTGCATTCCGCTTCAGTCGCCA
GAGCTTCGAGCCTTTTCGCCAGGTTGTGCAGGACACCCTGGCTGATCGTGCCGCAGCCGAAATCATCAGTCTTTAG

Upstream 100 bases:

>100_bases
CAACTGTTCGAACAGGTCTATTCACAGTTTCGCGATGGCATCGATACCGCGCTGTCGAGCAAGCGCGCTGGTCTGATCAT
GTCGCTTGGGGGCAGTCCTG

Downstream 100 bases:

>100_bases
CAATCTGGACAAGCCCATGGAAGGGAGTAACGCAAATGAGTGCAGACACAGGCAATGCGGCCTATCTGGGCACTATCCCC
AGTATGGTGGCGTTCCTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MSDPNEALLTGASLLSFADNVEPDLRQDIIDCLHHAKLVADDRHSFRGNWRAWLDVYQRSIAATGGSHGAGINDARLKIH
SFSDIGSLQLPVFDNAGELRQLYRSSLDRLLSSDHAKTFFSSWFTSGRSESFQLIPCSMHSEDEVTILLCSLQMTTIALR
PALYFWQVLGGEMQVHVVGTAFRFSRQSFEPFRQVVQDTLADRAAAEIISL

Sequences:

>Translated_211_residues
MSDPNEALLTGASLLSFADNVEPDLRQDIIDCLHHAKLVADDRHSFRGNWRAWLDVYQRSIAATGGSHGAGINDARLKIH
SFSDIGSLQLPVFDNAGELRQLYRSSLDRLLSSDHAKTFFSSWFTSGRSESFQLIPCSMHSEDEVTILLCSLQMTTIALR
PALYFWQVLGGEMQVHVVGTAFRFSRQSFEPFRQVVQDTLADRAAAEIISL
>Mature_210_residues
SDPNEALLTGASLLSFADNVEPDLRQDIIDCLHHAKLVADDRHSFRGNWRAWLDVYQRSIAATGGSHGAGINDARLKIHS
FSDIGSLQLPVFDNAGELRQLYRSSLDRLLSSDHAKTFFSSWFTSGRSESFQLIPCSMHSEDEVTILLCSLQMTTIALRP
ALYFWQVLGGEMQVHVVGTAFRFSRQSFEPFRQVVQDTLADRAAAEIISL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23590; Mature: 23459

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPNEALLTGASLLSFADNVEPDLRQDIIDCLHHAKLVADDRHSFRGNWRAWLDVYQRS
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHH
IAATGGSHGAGINDARLKIHSFSDIGSLQLPVFDNAGELRQLYRSSLDRLLSSDHAKTFF
HHHCCCCCCCCCCCCEEEEEECCCCCCEEECEECCHHHHHHHHHHHHHHHHHCHHHHHHH
SSWFTSGRSESFQLIPCSMHSEDEVTILLCSLQMTTIALRPALYFWQVLGGEMQVHVVGT
HHHHCCCCCCCEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEH
AFRFSRQSFEPFRQVVQDTLADRAAAEIISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDPNEALLTGASLLSFADNVEPDLRQDIIDCLHHAKLVADDRHSFRGNWRAWLDVYQRS
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHH
IAATGGSHGAGINDARLKIHSFSDIGSLQLPVFDNAGELRQLYRSSLDRLLSSDHAKTFF
HHHCCCCCCCCCCCCEEEEEECCCCCCEEECEECCHHHHHHHHHHHHHHHHHCHHHHHHH
SSWFTSGRSESFQLIPCSMHSEDEVTILLCSLQMTTIALRPALYFWQVLGGEMQVHVVGT
HHHHCCCCCCCEEEEECCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEH
AFRFSRQSFEPFRQVVQDTLADRAAAEIISL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA